diff --git a/modules/Bio/EnsEMBL/VEP/Constants.pm b/modules/Bio/EnsEMBL/VEP/Constants.pm index 7355d9037..e4542082a 100644 --- a/modules/Bio/EnsEMBL/VEP/Constants.pm +++ b/modules/Bio/EnsEMBL/VEP/Constants.pm @@ -53,7 +53,7 @@ use warnings; use base qw(Exporter); our $VEP_VERSION = 104; -our $VEP_SUB_VERSION = 1; +our $VEP_SUB_VERSION = 2; our @EXPORT_OK = qw( @FLAG_FIELDS diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm index 1d2f09a15..56fc77694 100755 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm @@ -116,6 +116,7 @@ my %NUMBERIFY_EXEMPT = ( 'gene_id' => 1, 'gene_symbol' => 1, 'transcript_id' => 1, + 'SYMBOL' => 1, # 'SYMBOL' is the gene symbol from SpliceAI plugin ); my @LIST_FIELDS = qw(