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nipah_results.xml
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<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>blastp</BlastOutput_program>
<BlastOutput_version>BLASTP 2.13.0+</BlastOutput_version>
<BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>pdb</BlastOutput_db>
<BlastOutput_query-ID>Query_39211</BlastOutput_query-ID>
<BlastOutput_query-def>unnamed protein product</BlastOutput_query-def>
<BlastOutput_query-len>167</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_matrix>BLOSUM62</Parameters_matrix>
<Parameters_expect>10</Parameters_expect>
<Parameters_gap-open>11</Parameters_gap-open>
<Parameters_gap-extend>1</Parameters_gap-extend>
<Parameters_filter>F</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_query-ID>Query_39211</Iteration_query-ID>
<Iteration_query-def>unnamed protein product</Iteration_query-def>
<Iteration_query-len>167</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>pdb|6XMP|A</Hit_id>
<Hit_def>Structure of P5A-ATPase Spf1, Apo form [Saccharomyces cerevisiae S288C] >pdb|6XMQ|A Structure of P5A-ATPase Spf1, AMP-PCP-bound form [Saccharomyces cerevisiae S288C] >pdb|6XMS|A Structure of P5A-ATPase Spf1, AlF4-bound form [Saccharomyces cerevisiae S288C] >pdb|6XMT|A Structure of P5A-ATPase Spf1, BeF3-bound form [Saccharomyces cerevisiae S288C] >pdb|6XMU|A Structure of P5A-ATPase Spf1, endogenous substrate-bound [Saccharomyces cerevisiae S288C]</Hit_def>
<Hit_accession>6XMP_A</Hit_accession>
<Hit_len>1239</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>30.4166</Hsp_bit-score>
<Hsp_score>67</Hsp_score>
<Hsp_evalue>1.70907</Hsp_evalue>
<Hsp_query-from>4</Hsp_query-from>
<Hsp_query-to>113</Hsp_query-to>
<Hsp_hit-from>121</Hsp_hit-from>
<Hsp_hit-to>227</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>24</Hsp_identity>
<Hsp_positive>48</Hsp_positive>
<Hsp_gaps>11</Hsp_gaps>
<Hsp_align-len>114</Hsp_align-len>
<Hsp_qseq>ASILLTLFRRTKKKYRRHTDDQVFNNPASKIKQKPGKIFCSAPVENLNKLRGECLRMMEMLKEETWRIYPVLLPQ-MELLERECRTPVTGQKVQMTYNWTQ---WLQTLYTMIM</Hsp_qseq>
<Hsp_hseq>AGSLQTFFQFQKKRFLWHENEQVFSSPKFLVDESP-------KIGDFQKCKGHSGDLTHLKRLYGENSFDIPIPTFMELFKEHAVAPLFVFQVFCVALWLLDEFWYYSLFNLFM</Hsp_hseq>
<Hsp_midline>A L T F+ KK++ H ++QVF++P + + P + + K +G + + + + + +P MEL + P+ +V W W +L+ + M</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>pdb|2DNV|A</Hit_id>
<Hit_def>Solution Structure of RSGI RUH-055, a Chromo Domain from Mus musculus cDNA [Mus musculus]</Hit_def>
<Hit_accession>2DNV_A</Hit_accession>
<Hit_len>64</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>27.335</Hsp_bit-score>
<Hsp_score>59</Hsp_score>
<Hsp_evalue>4.01164</Hsp_evalue>
<Hsp_query-from>93</Hsp_query-from>
<Hsp_query-to>129</Hsp_query-to>
<Hsp_hit-from>22</Hsp_hit-from>
<Hsp_hit-to>60</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>15</Hsp_identity>
<Hsp_positive>18</Hsp_positive>
<Hsp_gaps>2</Hsp_gaps>
<Hsp_align-len>39</Hsp_align-len>
<Hsp_qseq>QKVQMTY--NWTQWLQTLYTMIMEENVPDMDLLQALREG</Hsp_qseq>
<Hsp_hseq>RKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFESG</Hsp_hseq>
<Hsp_midline>+K +M Y W W Q T EEN+ D LL A G</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>pdb|7F3T|A</Hit_id>
<Hit_def>Chain A, Transmembrane protein 120A [Homo sapiens] >pdb|7F3T|B Chain B, Transmembrane protein 120A [Homo sapiens] >pdb|7F3U|A Chain A, Transmembrane protein 120A [Homo sapiens] >pdb|7F3U|B Chain B, Transmembrane protein 120A [Homo sapiens]</Hit_def>
<Hit_accession>7F3T_A</Hit_accession>
<Hit_len>375</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.4906</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>5.49981</Hsp_evalue>
<Hsp_query-from>55</Hsp_query-from>
<Hsp_query-to>94</Hsp_query-to>
<Hsp_hit-from>42</Hsp_hit-from>
<Hsp_hit-to>87</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>26</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>GECLRMMEMLKE------ETWRIYPVLLPQMELLERECRTPVTGQK</Hsp_qseq>
<Hsp_hseq>GDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQNNCTSSITRQK</Hsp_hseq>
<Hsp_midline>G+CLR E L++ ET R+Y + L ++ L+ C + +T QK</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>pdb|7N7P|A</Hit_id>
<Hit_def>Chain A, Ion channel TACAN [Homo sapiens] >pdb|7N7P|B Chain B, Ion channel TACAN [Homo sapiens]</Hit_def>
<Hit_accession>7N7P_A</Hit_accession>
<Hit_len>356</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.4906</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>5.7943</Hsp_evalue>
<Hsp_query-from>55</Hsp_query-from>
<Hsp_query-to>94</Hsp_query-to>
<Hsp_hit-from>23</Hsp_hit-from>
<Hsp_hit-to>68</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>26</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>GECLRMMEMLKE------ETWRIYPVLLPQMELLERECRTPVTGQK</Hsp_qseq>
<Hsp_hseq>GDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQNNCTSSITRQK</Hsp_hseq>
<Hsp_midline>G+CLR E L++ ET R+Y + L ++ L+ C + +T QK</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>pdb|7F6V|A</Hit_id>
<Hit_def>Chain A, Ion channel TACAN [Homo sapiens] >pdb|7F6V|B Chain B, Ion channel TACAN [Homo sapiens]</Hit_def>
<Hit_accession>7F6V_A</Hit_accession>
<Hit_len>343</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.4906</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>5.79464</Hsp_evalue>
<Hsp_query-from>55</Hsp_query-from>
<Hsp_query-to>94</Hsp_query-to>
<Hsp_hit-from>10</Hsp_hit-from>
<Hsp_hit-to>55</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>26</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>GECLRMMEMLKE------ETWRIYPVLLPQMELLERECRTPVTGQK</Hsp_qseq>
<Hsp_hseq>GDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQNNCTSSITRQK</Hsp_hseq>
<Hsp_midline>G+CLR E L++ ET R+Y + L ++ L+ C + +T QK</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>6</Hit_num>
<Hit_id>pdb|7CXR|A</Hit_id>
<Hit_def>Chain A, MCherry fluorescent protein,Ion channel TACAN [synthetic construct] >pdb|7CXR|B Chain B, MCherry fluorescent protein,Ion channel TACAN [synthetic construct]</Hit_def>
<Hit_accession>7CXR_A</Hit_accession>
<Hit_len>625</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>28.4906</Hsp_bit-score>
<Hsp_score>62</Hsp_score>
<Hsp_evalue>6.05134</Hsp_evalue>
<Hsp_query-from>55</Hsp_query-from>
<Hsp_query-to>94</Hsp_query-to>
<Hsp_hit-from>292</Hsp_hit-from>
<Hsp_hit-to>337</Hsp_hit-to>
<Hsp_query-frame>0</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>26</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>46</Hsp_align-len>
<Hsp_qseq>GECLRMMEMLKE------ETWRIYPVLLPQMELLERECRTPVTGQK</Hsp_qseq>
<Hsp_hseq>GDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQNNCTSSITRQK</Hsp_hseq>
<Hsp_midline>G+CLR E L++ ET R+Y + L ++ L+ C + +T QK</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>136675</Statistics_db-num>
<Statistics_db-len>36788597</Statistics_db-len>
<Statistics_hsp-len>0</Statistics_hsp-len>
<Statistics_eff-space>0</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>