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Copy pathfsFeedbackTab.cpp
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fsFeedbackTab.cpp
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#include "fsGUI.h"
#include "fsFeedbackTab.h"
#include <QFormLayout>
FeedbackTab::FeedbackTab (QWidget *parent)
: QWidget(parent)
{
QGridLayout *layout = new QGridLayout;
// create the ripple and spatial filters. Note that these are not shown until the buttons for them are pressed
rippleFilt = new RippleFilter(this);
connect(rippleFilt, SIGNAL(SendFSDataMessage(int, char*, int)), this, SIGNAL(SendFSDataMessage(int, char*, int)));
spatialFilt = new SpatialFilter(this);
connect(spatialFilt, SIGNAL(SendFSDataMessage(int, char*, int)), this, SIGNAL(SendFSDataMessage(int, char*, int)));
phaseFilt = new PhaseFilter(this);
connect(phaseFilt,SIGNAL(SendFSDataMessage(int,char*,int)), this, SIGNAL(SendFSDataMessage(int, char*, int)));
//latencyTest = new LatencyTest(this);
//connect(latencyTest, SIGNAL(SendFSDataMessage(int, char*, int)), this, SIGNAL(SendFSDataMessage(int, char*, int)));
rippleFilterEnabled = new QCheckBox("Enable Ripple Filter", this);
layout->addWidget(rippleFilterEnabled, 1, 0, Qt::AlignCenter | Qt::AlignVCenter);
connect(rippleFilterEnabled, SIGNAL(toggled(bool)), rippleFilt, SLOT(setFilterEnabled(bool)));
setRippleFilterParams = new QPushButton("Show Ripple Filter Parameters", this);
layout->addWidget(setRippleFilterParams, 1, 1, Qt::AlignCenter | Qt::AlignVCenter);
connect(setRippleFilterParams, SIGNAL(pressed()), this, SLOT(showRippleFilter()));
spatialFilterEnabled = new QCheckBox("Enable Spatial Filter", this);
layout->addWidget(spatialFilterEnabled, 2, 0, Qt::AlignCenter | Qt::AlignVCenter);
connect(spatialFilterEnabled, SIGNAL(toggled(bool)), spatialFilt, SLOT(setFilterEnabled(bool)));
setSpatialFilterParams = new QPushButton("Show Spatial Filter Parameters", this);
layout->addWidget(setSpatialFilterParams, 2, 1, Qt::AlignCenter | Qt::AlignVCenter);
connect(setSpatialFilterParams, SIGNAL(pressed()), this, SLOT(showSpatialFilter()));
// phaseFilterEnabled = new QLabel("<font color=grey>Theta Phase Filter",this);
// layout->addWidget(phaseFilterEnabled,3,0,Qt::AlignCenter | Qt::AlignVCenter );
// setPhaseFilterParams = new QPushButton("Show Theta Phase Parameters",this);
// layout->addWidget(setPhaseFilterParams,3,1,Qt::AlignCenter | Qt::AlignVCenter);
gpFilterEnabled = new QCheckBox("General Phase Filter",this);
layout->addWidget(gpFilterEnabled,4,0,Qt::AlignCenter | Qt::AlignVCenter );
connect(gpFilterEnabled,SIGNAL(toggled(bool)),phaseFilt,SLOT(setFilterEnabled(bool)));
setGpFilterParams = new QPushButton("Show General Phase Parameters", this);\
layout->addWidget(setGpFilterParams,4,1,Qt::AlignCenter | Qt::AlignVCenter);
connect(setGpFilterParams, SIGNAL(pressed()), this, SLOT(showPhaseFilter()));
digOutGateLabel = new QLabel("Digital Out Gate Port", this);
layout->addWidget(digOutGateLabel, 5,0, Qt::AlignCenter | Qt::AlignVCenter);
digOutGatePort = new QSpinBox();
digOutGatePort->setAlignment(Qt::AlignRight);
digOutGatePort->setRange(0, headerConf->maxDigitalPort(false));
digOutGatePort->setValue(0);
digOutGatePort->setSpecialValueText("Off");
digOutGatePort->setToolTip("Output port to gate stimulation; port high stops stim.");
layout->addWidget(digOutGatePort, 5,1, Qt::AlignCenter | Qt::AlignVCenter);
connect(digOutGatePort, SIGNAL(valueChanged(int)), this, SLOT(updateDigOutGate(int)));
QTimer *timer = new QTimer(this);
connect(timer, SIGNAL(timeout()), this, SLOT(checkRealtimeStatus()));
timer->start(500);
/* create boxes for the status of each filter */
rippleStatus = new QLabel("Ripple Filter Disabled");
spatialStatus = new QLabel("Spatial Filter Disabled");
thetaStatus = new QLabel("Theta Filter Disabled");
phaseStatus = new QLabel("GP Filter Disabled");
//latencyStatus = new QLabel("Latency Test Disabled");
statusGroupBox = new QGroupBox("Stimulation Status");
statusGroupBox->setStyleSheet("QGroupBox{border: 1px solid black;border-radius: 5px; margin-top: 1ex;}" \
"QGroupBox::title{subcontrol-origin: margin; subcontrol-position:top center; padding: 0 3px;}");
QHBoxLayout *statusBoxLayout = new QHBoxLayout;
statusBoxLayout->addWidget(rippleStatus, Qt::AlignCenter);
statusBoxLayout->addWidget(spatialStatus, Qt::AlignCenter);
//statusBoxLayout->addWidget(thetaStatus, Qt::AlignCenter);
statusBoxLayout->addWidget(phaseStatus,Qt::AlignCenter);
//statusBoxLayout->addWidget(latencyStatus, Qt::AlignCenter);
statusGroupBox->setLayout(statusBoxLayout);
layout->addWidget(statusGroupBox, 6, 0, 2, 2);
resetFeedbackButton = new QPushButton("Reset Feedback");
layout->addWidget(resetFeedbackButton, 7, 0, 1, 2, Qt::AlignCenter);
// click signal connected in spikeFSGUI
startFeedbackButton = new QPushButton("Start Feedback");
startFeedbackButton->setEnabled(true);
layout->addWidget(startFeedbackButton, 8, 0, Qt::AlignCenter);
//connect(startFeedbackButton, SIGNAL(clicked(bool)), rippleFilterEnabled, SLOT(setDisabled(bool)));
//connect(startFeedbackButton, SIGNAL(clicked(bool)), spatialFilterEnabled, SLOT(setDisabled(bool)));
// click signal connected to other objects in spikeFSGUI
connect(startFeedbackButton, SIGNAL(clicked(bool)), digOutGatePort, SLOT(setEnabled(bool)));
connect(startFeedbackButton, SIGNAL(clicked(bool)), rippleFilt, SLOT(setEnabled(bool)));
connect(startFeedbackButton, SIGNAL(clicked(bool)), spatialFilt, SLOT(setEnabled(bool)));
connect(startFeedbackButton, SIGNAL(clicked(bool)), phaseFilt, SLOT(setEnabled(bool)));
//connect(startFeedbackButton, SIGNAL(clicked(bool)), setRippleFilterParams, SLOT(setDisabled(bool)));
stopFeedbackButton = new QPushButton("Stop Feedback");
layout->addWidget(stopFeedbackButton, 8, 1, Qt::AlignCenter);
// click signal connected in spikeFSGUI
// disable until needed
stopFeedbackButton->setEnabled(false);
connect(stopFeedbackButton, SIGNAL(clicked(bool)), rippleFilt, SLOT(setDisabled(bool)));
connect(stopFeedbackButton, SIGNAL(clicked(bool)), spatialFilt, SLOT(setDisabled(bool)));
connect(stopFeedbackButton, SIGNAL(clicked(bool)), digOutGatePort, SLOT(setDisabled(bool)));
connect(startFeedbackButton, SIGNAL(clicked(bool)), phaseFilt, SLOT(setDisabled(bool)));
//connect(stopFeedbackButton, SIGNAL(clicked(bool)), setRippleFilterParams, SLOT(setEnabled(bool)));
stimulatorReady = false;
aOutReady = false;
setFeedbackEnabled();
setLayout(layout);
}
// Right now this is never called.
void FeedbackTab::updateStimulatorStatus(bool stimReady) {
stimulatorReady = stimReady;
setFeedbackEnabled();
}
void FeedbackTab::updateDigOutGate(int port) {
// send a message to FSData with the new status
SendFSDataMessage(FS_DIG_OUT_GATE_STATUS, (char *) &port, sizeof(int));
}
/*
void FeedbackTab::updateLatencyPortA(int portNum) {
latencyTest->stimAPort = portNum;
}
void FeedbackTab::updateLatencyPortB(int portNum) {
latencyTest->stimBPort = portNum;
}
*/
void FeedbackTab::setFeedbackEnabled() {
if (stimulatorReady || aOutReady) {
startFeedbackButton->setEnabled(true);
}
else {
startFeedbackButton->setEnabled(false);
}
}
void FeedbackTab::updateAllFilters() {
// set the status of all filters to update the parameters of any filters that are enabled.
// This is called if we restart FSData
qDebug() << "Updating all filters";
rippleFilt->updateRippleData();
spatialFilt->updateSpatialData();
phaseFilt->updateData();
}
void FeedbackTab::updateRippleStatus(QString status) {
rippleStatus->setText(status);
}
void FeedbackTab::updateSpatialStatus(QString status) {
spatialStatus->setText(status);
}
void FeedbackTab::updateThetaStatus(QString status) {
thetaStatus->setText(status);
}
void FeedbackTab::updatePhaseStatus(QString status)
{
phaseStatus->setText(status);
}
/*
void FeedbackTab::updateLatencyStatus(QString status) {
latencyStatus->setText(status);
}
*/
void FeedbackTab::showRippleFilter(void)
{
if (!rippleFilt->isVisible()) {
rippleFilt->setVisible(true);
}
rippleFilt->raise();
}
void FeedbackTab::showSpatialFilter(void)
{
if (!spatialFilt->isVisible()) {
spatialFilt->setVisible(true);
}
spatialFilt->raise();
}
/*
void FeedbackTab::showLatencyTest(void)
{
if (!latencyTest->isVisible()) {
latencyTest->setVisible(true);
}
latencyTest->raise();
}
*/
void FeedbackTab::showPhaseFilter(void)
{
if (!phaseFilt->isVisible()) {
phaseFilt->setVisible(true);
}
phaseFilt->raise();
}
void FeedbackTab::checkRealtimeStatus(void)
/* check the status of real time processing */
{
/* query spike_fsdata to get the status of ripple disruption */
SendFSDataMessage(FS_QUERY_RT_FEEDBACK_STATUS, NULL, 0);
return;
}
void FeedbackTab::updateRealtimeStatus(char *s)
{
//status->setText(QString(s));
}
void FeedbackTab::saveToXML(QDomDocument &doc, QDomElement &rootNode)
{
QDomElement rtConf = doc.createElement("feedbackConfiguration");
rootNode.appendChild(rtConf);
rtConf.setAttribute("rippleFilterEnabled", rippleFilterEnabled->isChecked());
rtConf.setAttribute("spatialFilterEnabled", spatialFilterEnabled->isChecked());
rippleFilt->saveToXML(doc, rtConf);
spatialFilt->saveToXML(doc, rtConf);
}
int FeedbackTab::loadFromXML(QDomNode &rtNode)
{
int error;
QDomElement nt;
rippleFilterEnabled->setChecked((bool)rtNode.toElement().attribute("rippleFilterEnabled").toInt());
spatialFilterEnabled->setChecked((bool)rtNode.toElement().attribute("spatialFilterEnabled").toInt());
QDomNodeList nList = rtNode.childNodes();
for (int i = 0; i < nList.length(); i++) {
nt = nList.at(i).toElement();
if (nList.at(i).nodeName() == "rippleConfiguration") {
error = rippleFilt->loadFromXML(nt);
}
else if (nList.at(i).nodeName() == "spatialConfiguration") {
error = spatialFilt->loadFromXML(nt);
}
//else if (nList.at(i).nodeName() == "latencyTestConfiguration") {
// latencyTest->loadFromXML(nt);
//}
else {
qDebug() << "Unknown configuration type within feedbackConfiguration";
return -1;
}
if(error < 0) {
return error;
}
}
return 1;
}
/*
LatencyTest::LatencyTest(QWidget *parent)
: QDialog(parent)
{
QGroupBox *algorithmParametersGroupBox = new QGroupBox("Latency Test Parameters");
QFormLayout *parametersLayout = new QFormLayout;
//threshold = new QSpinBox;
//threshold->setRange(0, 65535);
//threshold->setValue(65535);
//threshold->setAlignment(Qt::AlignRight);
//parametersLayout->addRow("Threshold", threshold);
//connect(threshold, SIGNAL(valueChanged(int)), this, SLOT(updateLatencyData(void)));
algorithmParametersGroupBox->setLayout(parametersLayout);
QVBoxLayout *layout = new QVBoxLayout;
layout->addWidget(algorithmParametersGroupBox, Qt::AlignCenter);
setLayout(layout);
show();
}
void LatencyTest::setFilterEnabled(bool value)
{
enabled = value;
updateLatencyData();
}
void LatencyTest::updateLatencyData(void)
{
LatencyTestParameters data;
data.enabled = enabled;
//data.threshold = threshold->value();
data.portA = stimAPort;
data.portB = stimBPort;
emit SendFSDataMessage(FS_SET_LATENCY_TEST_PARAMS, (char*)&data, sizeof(LatencyTestParameters));
}
void LatencyTest::saveToXML(QDomDocument &doc, QDomElement &rtConf)
{
QDomElement nt = doc.createElement("latencyTestConfiguration");
//nt.setAttribute("threshold", threshold->value());
rtConf.appendChild(nt);
}
int LatencyTest::loadFromXML(QDomElement &nt)
{
//threshold->setValue(nt.attribute("threshold").toInt());
return 1;
}
*/
ThetaPhaseStim::ThetaPhaseStim(QWidget *parent)
: QWidget(parent)
{
QGroupBox *algorithmParametersGroupBox = new QGroupBox("Theta Phase Stimulation Parameters");
QFormLayout *parametersLayout = new QFormLayout;
QComboBox *StimChan = new QComboBox(this);
//StimChan->insertItems(0, *(daq_io_widget->ChannelStrings));
parametersLayout->addRow("Tetrode / channel", StimChan);
QLineEdit *speedThresh = new QLineEdit(QString::number(FS_RT_DEFAULT_THETA_VEL), this);
speedThresh->setValidator(new QDoubleValidator(0.0, 100.0, 2, this));
speedThresh->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Speed threshold (cm/s)", speedThresh);
QSpinBox *filterDelay = new QSpinBox;
filterDelay->setRange(0, 20000);
filterDelay->setValue(FS_RT_DEFAULT_THETA_FILTER_DELAY);
filterDelay->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Filter Delay (msec)", filterDelay);
QSpinBox *thetaPhase = new QSpinBox;
thetaPhase->setRange(0, 360 * 4);
thetaPhase->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Desired phase of stimulation (deg)", thetaPhase);
algorithmParametersGroupBox->setLayout(parametersLayout);
QVBoxLayout *layout = new QVBoxLayout;
layout->addWidget(algorithmParametersGroupBox, Qt::AlignCenter);
setLayout(layout);
}
RippleFilter::RippleFilter(QWidget *parent)
: QDialog(parent)
{
baselineValuesMeanBuffer = (double *) calloc(spikeConf->ntrodes.length(), sizeof(double));
baselineValuesStdBuffer = (double *) calloc(spikeConf->ntrodes.length(), sizeof(double));
algorithmParametersGroupBox = new QGroupBox("Ripple Disruption Parameters");
QFormLayout *parametersLayout = new QFormLayout;
/* This needs to be updated to get this list of channels from Trodes */
/* QComboBox *StimChan = new QComboBox( false, this, "Channel Combo Box" );
StimChan->insertStringList(*(daq_io_widget->ChannelStrings));
parametersLayout->addRow("Tetrode / channel", StimChan); */
sampDivisor = new QSpinBox;
sampDivisor->setRange(0, 1000000);
sampDivisor->setValue(FS_RT_DEFAULT_SAMP_DIVISOR);
sampDivisor->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Sample Divisor", sampDivisor);
ripCoeff1 = new QLineEdit(QString::number(FS_RT_DEFAULT_RIPPLE_COEFF1));
ripCoeff1->setValidator(new QDoubleValidator(0.0, 2.0, 3, this));
ripCoeff1->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Rip. Coeff 1", ripCoeff1);
ripCoeff2 = new QLineEdit(QString::number(FS_RT_DEFAULT_RIPPLE_COEFF2));
ripCoeff2->setValidator(new QDoubleValidator(0.0, 2.0, 3, this));
ripCoeff2->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Rip. Coeff 2", ripCoeff2);
ripThresh = new QLineEdit(QString::number(FS_RT_DEFAULT_RIPPLE_THRESHOLD));
ripThresh->setValidator(new QDoubleValidator(0.0, 20.0, 2, this));
ripThresh->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Ripple Threshold (sd)", ripThresh);
nAboveThreshold = new QSpinBox;
nAboveThreshold->setRange(0, 128);
nAboveThreshold->setValue(FS_RT_DEFAULT_RIPPLE_N_ABOVE_THRESH);
nAboveThreshold->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Num Above Threshold", nAboveThreshold);
lockoutTime = new QSpinBox;
lockoutTime->setRange(0, 30000);
lockoutTime->setValue(FS_RT_DEFAULT_RIPPLE_LOCKOUT);
lockoutTime->setAlignment(Qt::AlignRight);
parametersLayout->addRow("Lockout period (timestamps)", lockoutTime);
detectNoRipples = new QCheckBox;
detectNoRipples->setChecked(false);
parametersLayout->addRow("Detect Ripple Absence", detectNoRipples);
detectNoRippleTime = new QSpinBox;
detectNoRippleTime->setRange(0, 300000);
detectNoRippleTime->setValue(60000);
detectNoRippleTime->setAlignment(Qt::AlignRight);
parametersLayout->addRow("No ripples window length (timestamps)", detectNoRippleTime);
baselineChannelValuesGroupBox = new QGroupBox("Baseline Ripple Values");
QGridLayout *baselineChannelValuesGroupBoxLayout = new QGridLayout;
baselineChannelValuesGroupBox->setLayout(baselineChannelValuesGroupBoxLayout );
rippleValueUpdateButtonGroup = new QButtonGroup();
pullRippleValuesButton = new QPushButton("Live Update");
pullRippleValuesButton->setCheckable(true);
pullRippleValuesButton->setChecked(true);
//stopResetRippleValuesButton = new QPushButton("Stop Update");
//stopResetRippleValuesButton->setCheckable(true);
pushRippleValuesButton = new QPushButton("Use Custom");
pushRippleValuesButton->setCheckable(true);
rippleValueUpdateButtonGroup->addButton(pullRippleValuesButton);
//rippleValueUpdateButtonGroup->addButton(stopResetRippleValuesButton);
rippleValueUpdateButtonGroup->addButton(pushRippleValuesButton);
baselineChannelValuesGroupBoxLayout->addWidget(pullRippleValuesButton, 0, 0);
//baselineChannelValuesGroupBoxLayout->addWidget(stopResetRippleValuesButton, 0, 1);
baselineChannelValuesGroupBoxLayout->addWidget(pushRippleValuesButton, 0, 1);
connect(pushRippleValuesButton, SIGNAL(toggled(bool)), this, SLOT(setBaselineValuesListEditable(bool)));
connect(rippleValueUpdateButtonGroup, SIGNAL(buttonToggled(int,bool)), this, SLOT(updateRippleData(void)));
baselineChannelValuesGroup = new QWidget;
baselineChannelValuesLayout = new QGridLayout;
baselineChannelValuesGroup->setLayout(baselineChannelValuesLayout);
baselineChannelValuesGroupBoxLayout->addWidget(baselineChannelValuesGroup, 1, 0, 1, 2);
//baselineChannelValuesGroup->setEnabled(false);
qDebug() << "FSGUI: 1";
baselineGroupMap = new QMap<int,QBaselineValueLine>;
baselineChannelValuesLayout->addWidget(new QLabel("ID"), 0, 0);
baselineChannelValuesLayout->addWidget(new QLabel("Mean"), 0, 1);
baselineChannelValuesLayout->addWidget(new QLabel("Std"), 0, 2);
for(int ii = 0; ii < spikeConf->ntrodes.length(); ii++) {
int tmpNTrodeId = spikeConf->ntrodes[ii]->nTrodeId;
QLabel *ntrodeIDLabel = new QLabel(QString::number(tmpNTrodeId));
ntrodeIDLabel->setVisible(false);
baselineChannelValuesLayout->addWidget(ntrodeIDLabel, ii+1, 0);
QLineEdit *newBaselineMeanEdit = new QLineEdit("0");
newBaselineMeanEdit->setValidator(new QDoubleValidator(-100.0, 100.0, 4, this));
newBaselineMeanEdit->setAlignment(Qt::AlignRight);
newBaselineMeanEdit->setVisible(false);
baselineChannelValuesLayout->addWidget(newBaselineMeanEdit, ii+1, 1);
// Using new QT5 style of connect to allow C++11 lambda functions
connect(newBaselineMeanEdit, &QLineEdit::textChanged,
[=](QString text){this->updateBaselineValueMeanBuffer(ii,text);});
QLineEdit *newBaselineStdEdit = new QLineEdit("0");
newBaselineStdEdit->setValidator(new QDoubleValidator(-100.0, 100.0, 4, this));
newBaselineStdEdit->setAlignment(Qt::AlignRight);
newBaselineStdEdit->setVisible(false);
baselineChannelValuesLayout->addWidget(newBaselineStdEdit, ii+1, 2);
// Using new QT5 style of connect to allow C++11 lambda functions
connect(newBaselineStdEdit, &QLineEdit::textChanged,
[=](QString text){this->updateBaselineValueStdBuffer(ii,text);});
baselineGroupMap->insert(ii, QBaselineValueLine(ntrodeIDLabel,newBaselineMeanEdit, newBaselineStdEdit));
}
qDebug() << "FSGUI: 2";
setBaselineValuesListEditable(false);
qDebug() << "FSGUI: 3";
parametersLayout->addRow(baselineChannelValuesGroupBox);
connect(sampDivisor, SIGNAL(valueChanged(int)), this, SLOT(updateRippleData(void)));
connect(ripCoeff1, SIGNAL(textChanged(const QString &)), this, SLOT(updateRippleData(void)));
connect(ripCoeff2, SIGNAL(textChanged(const QString &)), this, SLOT(updateRippleData(void)));
connect(ripThresh, SIGNAL(textChanged(const QString &)), this, SLOT(updateRippleData(void)));
connect(lockoutTime, SIGNAL(valueChanged(int)), this, SLOT(updateRippleData(void)));
connect(nAboveThreshold, SIGNAL(valueChanged(int)), this, SLOT(updateRippleData(void)));
connect(detectNoRipples, SIGNAL(clicked()), this, SLOT(updateRippleData(void)));
connect(detectNoRippleTime, SIGNAL(valueChanged(int)), this, SLOT(updateRippleData(void)));
algorithmParametersGroupBox->setLayout(parametersLayout);
QVBoxLayout *layout = new QVBoxLayout;
layout->addWidget(algorithmParametersGroupBox, Qt::AlignCenter);
setLayout(layout);
}
void RippleFilter::setEnableCustomBaselineValues(bool enabled) {
baselineChannelValuesGroup->setEnabled(enabled);
}
void RippleFilter::setBaselineValuesListEditable(bool editable) {
for(int ii = 0; ii < spikeConf->ntrodes.length(); ii++) {
(std::get<1>(baselineGroupMap->value(ii)))->setReadOnly(!editable);
(std::get<2>(baselineGroupMap->value(ii)))->setReadOnly(!editable);
if(editable) {
(std::get<1>(baselineGroupMap->value(ii)))->setStyleSheet("color: rgb(0,0,0);");
(std::get<2>(baselineGroupMap->value(ii)))->setStyleSheet("color: rgb(0,0,0);");
} else {
(std::get<1>(baselineGroupMap->value(ii)))->setStyleSheet("color: rgb(150,150,150);");
(std::get<2>(baselineGroupMap->value(ii)))->setStyleSheet("color: rgb(150,150,150);");
}
}
}
void RippleFilter::setBaselineValuesSelect(qint16 ind, bool selected) {
//qDebug() << "Updating Baseline Values Ripple";
std::get<0>(baselineGroupMap->value(ind))->setVisible(selected);
std::get<1>(baselineGroupMap->value(ind))->setVisible(selected);
std::get<2>(baselineGroupMap->value(ind))->setVisible(selected);
}
void RippleFilter::setFilterEnabled(bool value)
{
enabled = value;
updateRippleData();
}
void RippleFilter::updateBaselineValuesListMean(double *means) {
for(int ii = 0; ii < spikeConf->ntrodes.length(); ii++) {
(std::get<1>(baselineGroupMap->value(ii)))->setText(QString::number(means[ii]));
}
}
void RippleFilter::updateBaselineValuesListStd(double *stds) {
for(int ii = 0; ii < spikeConf->ntrodes.length(); ii++) {
(std::get<2>(baselineGroupMap->value(ii)))->setText(QString::number(stds[ii]));
}
}
void RippleFilter::updateBaselineValueMeanBuffer(int nTrodeIndex, QString mean) {
baselineValuesMeanBuffer[nTrodeIndex] = mean.toDouble();
updateCustomBaselineMean();
//qDebug() << "mean " << spikeConf->ntrodes[nTrodeIndex]->nTrodeId << " " << mean;
}
void RippleFilter::updateBaselineValueStdBuffer(int nTrodeIndex, QString std) {
baselineValuesStdBuffer[nTrodeIndex] = std.toDouble();
updateCustomBaselineStd();
//qDebug() << "std " <<nTrodeID << " " << std;
}
void RippleFilter::updateCustomBaselineMean(void) {
if(pushRippleValuesButton->isChecked()) {
emit SendFSDataMessage(FS_SET_CUSTOM_RIPPLE_BASELINE_MEAN, (char *)baselineValuesMeanBuffer,
spikeConf->ntrodes.length()*sizeof(double));
}
}
void RippleFilter::updateCustomBaselineStd(void) {
if(pushRippleValuesButton->isChecked()) {
emit SendFSDataMessage(FS_SET_CUSTOM_RIPPLE_BASELINE_STD, (char *)baselineValuesStdBuffer,
spikeConf->ntrodes.length()*sizeof(double));
}
}
void RippleFilter::updateRippleData(void)
{
RippleFilterParameters data;
qDebug() << "Update ripple param";
data.sampDivisor = sampDivisor->value();
data.ripCoeff1 = ripCoeff1->text().toDouble();
data.ripCoeff2 = ripCoeff2->text().toDouble();
data.ripple_threshold = ripThresh->text().toDouble();
data.n_above_thresh = nAboveThreshold->value();
data.lockoutTime = lockoutTime->value();
data.detectNoRipples = detectNoRipples->isChecked();
data.detectNoRippleTime = detectNoRippleTime->value();
data.enabled = enabled;
data.useCustomBaseline = pushRippleValuesButton->isChecked();
data.updateCustomBaseline = pullRippleValuesButton->isChecked();
qDebug() << "FSGUI RippleFilterParameters update custom baseline " << data.useCustomBaseline << " " << data.updateCustomBaseline;
emit SendFSDataMessage(FS_SET_RIPPLE_STIM_PARAMS, (char*)&data, sizeof(RippleFilterParameters));
}
void RippleFilter::saveToXML(QDomDocument &doc, QDomElement &rtConf)
{
QDomElement nt = doc.createElement("rippleConfiguration");
nt.setAttribute("sampleDivisor", sampDivisor->value());
nt.setAttribute("ripCoeff1", ripCoeff1->text().toDouble());
nt.setAttribute("ripCoeff2", ripCoeff2->text().toDouble());
nt.setAttribute("ripThresh", ripThresh->text().toDouble());
nt.setAttribute("nAboveThresh", nAboveThreshold->value());
nt.setAttribute("lockoutTime", lockoutTime->value());
nt.setAttribute("lockoutTime", lockoutTime->value());
nt.setAttribute("detectNoRipples", detectNoRipples->isChecked());
nt.setAttribute("detectNoRippleTime", detectNoRippleTime->value());
QDomElement rippleBaselineList = doc.createElement("BaselineList");
if(pullRippleValuesButton->isChecked()) {
rippleBaselineList.setAttribute("mode", "live");
} else if(pushRippleValuesButton->isChecked()) {
rippleBaselineList.setAttribute("mode", "custom");
}
nt.appendChild(rippleBaselineList);
//baselineGroupList->iterator
//QListIterator<QBaselineValueLine> baselineGroupIter(baselineGroupList);
for(QMap<int,QBaselineValueLine>::const_iterator item = baselineGroupMap->begin();
item != baselineGroupMap->end(); ++item) {
QDomElement nTrodeRippleBaselineValue = doc.createElement("nTrodeValue");
nTrodeRippleBaselineValue.setAttribute("index", item.key());
nTrodeRippleBaselineValue.setAttribute("mean", std::get<1>(item.value())->text().toDouble());
nTrodeRippleBaselineValue.setAttribute("std", std::get<2>(item.value())->text().toDouble());
rippleBaselineList.appendChild(nTrodeRippleBaselineValue);
}
rtConf.appendChild(nt);
}
int RippleFilter::loadFromXML(QDomElement &nt)
{
sampDivisor->setValue(nt.attribute("sampleDivisor").toInt());
ripCoeff1->setText(nt.attribute("ripCoeff1"));
ripCoeff2->setText(nt.attribute("ripCoeff2"));
ripThresh->setText(nt.attribute("ripThresh"));
nAboveThreshold->setValue(nt.attribute("nAboveThresh").toInt());
lockoutTime->setValue(nt.attribute("lockoutTime").toInt());
detectNoRipples->setChecked((bool) nt.attribute("detectNoRipples").toInt());
detectNoRippleTime->setValue(nt.attribute("detectNoRippleTime").toInt());
QDomNodeList nList = nt.childNodes();
int rippleBaselineValueEntryCount = 0; // To make sure only one ripple baseline entry exists
for(int ii = 0; ii < nList.length(); ii ++) {
qDebug() << nList.at(ii).toElement().tagName() << rippleBaselineValueEntryCount;
if(nList.at(ii).toElement().tagName().compare(QString("BaselineList")) == 0 &&
rippleBaselineValueEntryCount < 1) {
rippleBaselineValueEntryCount ++;
QString rippleBaselineMode = nList.at(ii).toElement().attribute("mode");
if(rippleBaselineMode.compare(QString("live")) == 0) {
pullRippleValuesButton->setChecked(true);
// don't load baseline values, in config file for recordkeeping purposes
} else if(rippleBaselineMode.compare(QString("custom")) == 0) {
pushRippleValuesButton->setChecked(true);
// load custom baseline values
QDomNodeList ntrodeBaselineList = nList.at(ii).childNodes();
for(int ntrodeInd = 0; ntrodeInd < ntrodeBaselineList.length(); ntrodeInd ++) {
QDomElement ntrodeBaselineElem = ntrodeBaselineList.at(ntrodeInd).toElement();
if(ntrodeBaselineElem.tagName().compare(QString("nTrodeValue")) == 0) {
int nTrodeIndex = ntrodeBaselineElem.attribute("index").toInt();
std::get<1>(baselineGroupMap->value(nTrodeIndex))->setText(ntrodeBaselineElem.attribute("mean"));
std::get<2>(baselineGroupMap->value(nTrodeIndex))->setText(ntrodeBaselineElem.attribute("std"));
} else {
qDebug() << "fsFeedbackTab: Config Error expected nTrodeValue.";
return -1;
}
}
} else {
qDebug() << "fsFeedbackTab: Config Error BaselineList mode not live or custom.";
return -1;
}
} else {
qDebug() << "fsFeedbackTab: Config Error expecting single BaselineList entry.";
return -1;
}
}
return 1;
}
SpatialFilter::SpatialFilter(QWidget *parent)
: QDialog(parent)
{
QGroupBox *algorithmParametersGroupBox = new QGroupBox("Spatial Filter Parameters");
QGridLayout *parametersLayout = new QGridLayout;
int row = 0;
lowerLeftX = new QSpinBox;
/* FIX RANGES TO IMAGE SIZE */
lowerLeftX->setRange(0, 2000);
lowerLeftX->setValue(0);
lowerLeftX->setAlignment(Qt::AlignRight);
lowerLeftY = new QSpinBox;
lowerLeftY->setRange(0, 2000);
lowerLeftY->setValue(0);
lowerLeftY->setAlignment(Qt::AlignRight);
parametersLayout->addWidget(new QLabel("Lower Left (X,Y)"), row, row, 1, 1, Qt::AlignRight);
parametersLayout->addWidget(lowerLeftX, row, 1);
parametersLayout->addWidget(lowerLeftY, row, 2);
upperRightX = new QSpinBox;
upperRightX->setRange(0, 2000);
upperRightX->setValue(0);
upperRightX->setAlignment(Qt::AlignRight);
upperRightY = new QSpinBox;
upperRightY->setRange(0, 2000);
upperRightY->setValue(0);
upperRightY->setAlignment(Qt::AlignRight);
parametersLayout->addWidget(new QLabel("Upper Right (X,Y)"), ++row, 0, 1, 1, Qt::AlignRight);
parametersLayout->addWidget(upperRightX, row, 1);
parametersLayout->addWidget(upperRightY, row, 2);
cmPerPix = new QDoubleSpinBox;
cmPerPix->setRange(0, 10);
cmPerPix->setValue(0.2);
cmPerPix->setAlignment(Qt::AlignRight);
parametersLayout->addWidget(new QLabel("cm per pixel"), ++row, 0, 1, 1, Qt::AlignRight);
parametersLayout->addWidget(cmPerPix, row, 1);
minSpeedThresh = new QLineEdit(QString::number(-1), this);
minSpeedThresh->setValidator(new QDoubleValidator(-1, 200.0, 2, this));
minSpeedThresh->setAlignment(Qt::AlignRight);
parametersLayout->addWidget(new QLabel("Minimum Speed"), ++row, 0, 1, 1, Qt::AlignRight);
parametersLayout->addWidget(minSpeedThresh, row, 1, 1, 1);
parametersLayout->addWidget(new QLabel("cm/sec"), row, 2, 1, 1);
maxSpeedThresh = new QLineEdit(QString::number(500), this);
maxSpeedThresh->setValidator(new QDoubleValidator(0.0, 4.0, 2, this));
maxSpeedThresh->setAlignment(Qt::AlignRight);
parametersLayout->addWidget(new QLabel("Maximum Speed"), ++row, 0, 1, 1, Qt::AlignRight);
parametersLayout->addWidget(maxSpeedThresh, row, 1, 1, 1);
parametersLayout->addWidget(new QLabel("cm/sec"), row, 2, 1, 1);
lockoutTime = new QSpinBox;
lockoutTime->setRange(0, 100000);
lockoutTime->setValue(7500);
lockoutTime->setAlignment(Qt::AlignRight);
parametersLayout->addWidget(new QLabel("Min On/Off Length"), ++row, 0, 1, 1, Qt::AlignRight);
parametersLayout->addWidget(lockoutTime, row, 1);
parametersLayout->addWidget(new QLabel("timestamp units"), row, 2, 1, 1);
parametersLayout->setColumnStretch(0, 2);
connect(lowerLeftX, SIGNAL(valueChanged(int)), this, SLOT(updateSpatialData(void)));
connect(lowerLeftY, SIGNAL(valueChanged(int)), this, SLOT(updateSpatialData(void)));
connect(upperRightX, SIGNAL(valueChanged(int)), this, SLOT(updateSpatialData(void)));
connect(upperRightY, SIGNAL(valueChanged(int)), this, SLOT(updateSpatialData(void)));
connect(cmPerPix, SIGNAL(valueChanged(double)), this, SLOT(updateSpatialData(void)));
connect(minSpeedThresh, SIGNAL(textChanged(const QString &)), this, SLOT(updateSpatialData(void)));
connect(maxSpeedThresh, SIGNAL(textChanged(const QString &)), this, SLOT(updateSpatialData(void)));
connect(lockoutTime, SIGNAL(valueChanged(int)), this, SLOT(updateSpatialData(void)));
algorithmParametersGroupBox->setLayout(parametersLayout);
QVBoxLayout *layout = new QVBoxLayout;
layout->addWidget(algorithmParametersGroupBox, Qt::AlignCenter);
setLayout(layout);
}
void SpatialFilter::setFilterEnabled(bool value)
{
enabled = value;
updateSpatialData();
}
void SpatialFilter::updateSpatialData(void)
{
SpatialFilterParameters data;
data.lowerLeftX = lowerLeftX->value();
data.lowerLeftY = lowerLeftY->value();
data.upperRightX = upperRightX->value();
data.upperRightY = upperRightY->value();
data.minSpeed = minSpeedThresh->text().toDouble();
data.maxSpeed = maxSpeedThresh->text().toDouble();
data.lockoutTime = lockoutTime->value();
data.enabled = enabled;
data.cmPerPix = cmPerPix->value();
emit SendFSDataMessage(FS_SET_SPATIAL_STIM_PARAMS, (char*)&data, sizeof(SpatialFilterParameters));
}
void SpatialFilter::saveToXML(QDomDocument &doc, QDomElement &rtConf)
{
QDomElement nt = doc.createElement("spatialConfiguration");
nt.setAttribute("lowerLeftX", lowerLeftX->value());
nt.setAttribute("lowerLeftY", lowerLeftY->value());
nt.setAttribute("upperRightX", upperRightX->value());
nt.setAttribute("upperRightY", upperRightY->value());
nt.setAttribute("cmPerPix", cmPerPix->value());
nt.setAttribute("minSpeed", minSpeedThresh->text().toDouble());
nt.setAttribute("maxSpeed", maxSpeedThresh->text().toDouble());
nt.setAttribute("lockoutTime", lockoutTime->value());
rtConf.appendChild(nt);
}
int SpatialFilter::loadFromXML(QDomElement &nt)
{
lowerLeftX->setValue(nt.attribute("lowerLeftX").toInt());
lowerLeftY->setValue(nt.attribute("lowerLeftY").toInt());
upperRightX->setValue(nt.attribute("upperRightX").toInt());
upperRightY->setValue(nt.attribute("upperRightY").toInt());
cmPerPix->setValue(nt.attribute("cmPerPix").toDouble());
minSpeedThresh->setText(nt.attribute("minSpeed"));
maxSpeedThresh->setText(nt.attribute("maxSpeed"));
lockoutTime->setValue(nt.attribute("lockoutTime").toDouble());
return 1;
}
PhaseFilter::PhaseFilter(QWidget *parent) // TODO finish gui elems
: QDialog(parent)
{
QGroupBox *filterParametersGroupBox = new QGroupBox("Filter Parameters");
QGridLayout *fParamLayout = new QGridLayout;
filterParametersGroupBox->setStyleSheet("QGroupBox { font-weight: bold; } ");
QGroupBox *smoothingParametersGroupBox = new QGroupBox("Filter Smoothing Parameters");
QGridLayout *sParamLayout = new QGridLayout;
smoothingParametersGroupBox->setStyleSheet("QGroupBox { font-weight: bold; }");
QGroupBox *targetParametersGroupBox = new QGroupBox("Targeting Parameters");
QGridLayout *tParamLayout = new QGridLayout;
targetParametersGroupBox->setStyleSheet("QGroupBox { font-weight: bold; }");
QGroupBox *enableDisableGroupBox = new QGroupBox("Enable / Disable");
enableDisableGroupBox->setStyleSheet("QGroupBox { font-weight: bold; }");
QGridLayout *eParamLayout = new QGridLayout;
/* ----------------------------------- */
int row = 0;
// Filter combo box
filterType = new QComboBox;
filterType->addItem("Butterworth");
fParamLayout->addWidget(new QLabel("Filter Type"),row,0,1,1,Qt::AlignLeft);
fParamLayout->addWidget(filterType,row,1,1,2,Qt::AlignLeft);
// Filter order spin box
filterOrder = new QSpinBox;
filterOrder->setRange(1,8); // this can be easily expanded in phasefilter.cpp
filterOrder->setValue(4);
fParamLayout->addWidget(new QLabel("Filter Order"),++row,0,1,1,Qt::AlignLeft);
fParamLayout->addWidget(filterOrder,row,1,1,1,Qt::AlignLeft);
// Frequency Selectors
freqLow = new QLineEdit;
freqLow->setValidator(new QDoubleValidator(0.0,150.0,2,this));
freqLow->setText("6");
fParamLayout->addWidget(new QLabel("Low Bandpass"),++row,0,1,1,Qt::AlignLeft);
fParamLayout->addWidget(freqLow, row, 1, 1, 1, Qt::AlignLeft);
freqHigh = new QLineEdit;
freqHigh->setValidator(new QDoubleValidator(0.0,150.0,2,this));
freqHigh->setText("12");
fParamLayout->addWidget(new QLabel("High Bandpass"),++row,0,1,1,Qt::AlignLeft);
fParamLayout->addWidget(freqHigh, row, 1, 1, 1, Qt::AlignLeft);
QFrame *line = new QFrame(this);
line->setObjectName(QString::fromUtf8("line"));
line->setGeometry(QRect(320, 150, 118, 3));
line->setFrameShape(QFrame::HLine);
line->setFrameShadow(QFrame::Sunken);
fParamLayout->addWidget(line,++row,0,2,3,Qt::AlignLeft);
filterParametersGroupBox->setLayout(fParamLayout);
/* ----------------------------------- */
row = 0;
smoothingSize = new QSpinBox;
smoothingSize->setRange(1,30000);
smoothingSize->setValue(1024);
sParamLayout->addWidget(new QLabel("Samples to Smooth"),row,0,Qt::AlignLeft);
sParamLayout->addWidget(smoothingSize,row,1,Qt::AlignLeft);
smoothingEnabled = new QCheckBox;
sParamLayout->addWidget(new QLabel("Enabled Smoothing"),++row,0,Qt::AlignLeft);
sParamLayout->addWidget(smoothingEnabled,row,1,Qt::AlignLeft);
smoothingParametersGroupBox->setLayout(sParamLayout);
/* -------------------------------------*/
row = 0;
targetPhase = new QComboBox;
targetPhase->addItem("None");
targetPhase->addItem("Peak");
targetPhase->addItem("Falling Zero");
targetPhase->addItem("Trough");
targetPhase->addItem("Rising Zero");
tParamLayout->addWidget(new QLabel("Target Phase"), row, 0, 1,1, Qt::AlignLeft);
tParamLayout->addWidget(targetPhase, row, 1,1, Qt::AlignRight);
targetPower = new QLineEdit;
targetPower->setValidator(new QDoubleValidator(0.0, 100.0, 2, this));
targetPower->setText("0");
tParamLayout->addWidget(new QLabel("Target Power"),++row,0,1,1,Qt::AlignLeft);
tParamLayout->addWidget(targetPower,row,1,1,1,Qt::AlignRight);
delay = new QSpinBox;
delay->setRange(0,30000);
tParamLayout->addWidget(new QLabel("Delay\n(not supported yet)"), ++row, 0, 1,1,Qt::AlignLeft);
tParamLayout->addWidget(delay,row,1,1,1,Qt::AlignLeft);
bufferSize = new QSpinBox;
bufferSize->setRange(1,30000);
bufferSize->setValue(125);
bufferSizeSuggest = new QLabel("1/2-longest\nwavelength: 125");bufferSizeSuggest->setStyleSheet("*{ color:red; font-size: 9px;}");
tParamLayout->addWidget(new QLabel("Buffer Size\n(For Averagin Amp)"),++row,0,1,1,Qt::AlignLeft);
tParamLayout->addWidget(bufferSize,row,1,1,1,Qt::AlignLeft);
tParamLayout->addWidget(bufferSizeSuggest,row,2,1,1,Qt::AlignLeft);
lockoutTime = new QSpinBox;
lockoutTime->setRange(0,100000);
lockoutTime->setValue(10000);
tParamLayout->addWidget(new QLabel("Lockout Time"), ++row, 0, 1,1,Qt::AlignLeft);
tParamLayout->addWidget(lockoutTime, row, 1, 1,1,Qt::AlignLeft);
targetParametersGroupBox->setLayout(tParamLayout);
/* ----------------------------------- */
row = 0;
nAtRequirement = new QSpinBox;
eParamLayout->addWidget(new QLabel("NTrodes At \nRequirement"),row,0,Qt::AlignLeft);
eParamLayout->addWidget(nAtRequirement,row,1,Qt::AlignLeft);
nAtRequirement->setValue(1);
enablePhase = new QCheckBox;
eParamLayout->addWidget(new QLabel("Enable Phase"), ++row, 0, Qt::AlignLeft);
eParamLayout->addWidget(enablePhase,row,1,Qt::AlignLeft);
enablePhase->setChecked(true);
enablePower = new QCheckBox;
eParamLayout->addWidget(new QLabel("Enable Power"),++row,0,Qt::AlignLeft);
eParamLayout->addWidget(enablePower);
enablePower->setChecked(true);
enableDisableGroupBox->setLayout(eParamLayout);
//fParamLayout->setColumnStretch(0, 2);
connect(filterType, SIGNAL(currentIndexChanged(int)), this, SLOT(updateData(void)));
connect(filterOrder, SIGNAL(valueChanged(int)), this, SLOT(updateData(void)));
connect(freqLow, SIGNAL(textChanged(QString)), this, SLOT(updateData(void)));
connect(freqHigh, SIGNAL(textChanged(QString)), this, SLOT(updateData(void)));
connect(bufferSize, SIGNAL(valueChanged(int)), this, SLOT(updateData(void)));
connect(smoothingEnabled, SIGNAL(stateChanged(int)), this, SLOT(updateData(void)));
connect(smoothingSize,SIGNAL(valueChanged(int)),this,SLOT(updateData(void)));
connect(targetPhase, SIGNAL(currentIndexChanged(int)), this, SLOT(updateData(void)));
connect(targetPower, SIGNAL(textChanged(QString)), this, SLOT(updateData(void)));
connect(delay,SIGNAL(valueChanged(int)),this,SLOT(updateData(void)));
connect(nAtRequirement,SIGNAL(valueChanged(int)), this, SLOT(updateData()));
connect(enablePhase, SIGNAL(stateChanged(int)), this, SLOT(updateData(void)));
connect(enablePower, SIGNAL(stateChanged(int)), this, SLOT(updateData(void)));