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Create input files for TCI analysis (2/N) #60
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Co-authored-by: Ryan Corbett <[email protected]>
Co-authored-by: Ryan Corbett <[email protected]>
…into achroni/explore-TMB-mut-script
Generate dndscv reference file
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Purpose/implementation Section
What scientific question is your analysis addressing?
This notebook is for preparing input files for FastClone.
We are using only the non-synonymous mutations for clone inferences.
What was your approach?
What GitHub issue does your pull request address?
Closes #59
Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.
Which areas should receive a particularly close look?
Is there anything that you want to discuss further?
Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?
Results
What types of results are included (e.g., table, figure)?
What is your summary of the results?
Reproducibility Checklist
Documentation Checklist
READMEand it is up to date.analyses/README.mdand the entry is up to date.