Port database loading scripts to AllianceMine

[dondi]

Now that InterMine is no more, we need to port our loading scripts to AllianceMine

[ntran18]

Add documents to the Wiki. I wanted to take a break from it last week, so I didn't investigate PPI. I will do it this week.

[ntran18]

I got response from SGD support about the API or service they have. I will test look at it and see if it works.

Update: Good news! There is a web service for AllianceMIne.

[ntran18]

I updated the Wiki with all analyses for GRN and PPI and the proposed solutions for each.

[dondi]

@ntran18’s PR to query the gene source rather than network in order to find ERT1 has been merged but appears to still not find ERT1 on the installed beta deployment. @ntran18 will investigate the issue

Further @ntran18 will meet with @kdahlquist to clarify the updated queries on AllianceMine and other content in the wiki writeup

[ntran18]

The ERT1 issue should be fixed now. The issue was that when we updated the database, we forgot to update the database's GRN gene table.