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Hello,
Could you look at the four terms below in PMID: 39046578 please?
Term Location Molecule Name
1/ Disaccharide 1 beta Scheme 1, Fig 1 α-D-GlcNAcp-(1 → 4)- β-D-(2,3-diNAc) ManAp 2/ Disaccharide 1 alpha Scheme 1, Fig 1 α-D-GlcNAcp-(1 → 4)- α-D-(2,3-diNAc) ManAp 3/ Trisaccharide 2 beta Scheme 9, Fig 1 α-D-GlcNAcp-(1 → 4)-β-D-(2,3-diNAc)ManAp-(1 → 3)- β-L-(4NMe)FucNAcp 4/ Pentasaccharide 5 Scheme 9, Fig 1 α-D-GlcNAcp- (1 → 4)˗ β-D-(2,3-diNAc) ManAp (1 → 3)˗ β-L-(4NMe)FucNAcp-(1 → 6) –[L-α˗D- Hepp-(1 → 4)] -α-D-GlcNp
They are Bordetella pertussis lipooligosaccharides.
https://pubmed.ncbi.nlm.nih.gov/39046578/
PMID_39046578.pdf
Do these structures exist in ChEBI already?
If so, could you tell me their ChEBI IDs? If not, would you be able to create them?
This is needed for an IEDB curation.
Thanks, Catriona
@ rvita
The text was updated successfully, but these errors were encountered:
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Hello,
Could you look at the four terms below in PMID: 39046578 please?
Term Location Molecule Name
1/ Disaccharide 1 beta Scheme 1, Fig 1 α-D-GlcNAcp-(1 → 4)- β-D-(2,3-diNAc) ManAp
2/ Disaccharide 1 alpha Scheme 1, Fig 1 α-D-GlcNAcp-(1 → 4)- α-D-(2,3-diNAc) ManAp
3/ Trisaccharide 2 beta Scheme 9, Fig 1 α-D-GlcNAcp-(1 → 4)-β-D-(2,3-diNAc)ManAp-(1 → 3)- β-L-(4NMe)FucNAcp
4/ Pentasaccharide 5 Scheme 9, Fig 1 α-D-GlcNAcp- (1 → 4)˗ β-D-(2,3-diNAc) ManAp (1 → 3)˗ β-L-(4NMe)FucNAcp-(1 → 6) –[L-α˗D- Hepp-(1 → 4)] -α-D-GlcNp
They are Bordetella pertussis lipooligosaccharides.
https://pubmed.ncbi.nlm.nih.gov/39046578/
PMID_39046578.pdf
Do these structures exist in ChEBI already?
If so, could you tell me their ChEBI IDs? If not, would you be able to create them?
This is needed for an IEDB curation.
Thanks,
Catriona
@ rvita
The text was updated successfully, but these errors were encountered: