Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

compile fails with setuptools>=72.2.0 (manylinux2010) #794

Open
chargr opened this issue Aug 28, 2024 · 1 comment
Open

compile fails with setuptools>=72.2.0 (manylinux2010) #794

chargr opened this issue Aug 28, 2024 · 1 comment

Comments

@chargr
Copy link

chargr commented Aug 28, 2024

Describe the bug
Not sure if this should be considered a setuptools issue.

Compile completes successfully using setuptools 72.1.0

Compile fails with this error on 72.2.0

  g++ -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -pthread -shared build/temp.linux-x86_64-cpython-39/src/_igraph/arpackobject.o build/temp.linux-x86_64-cpython-39/src/_igraph/attributes.o build/temp.linux-x86_64-cpython-39/src/_igraph/bfsiter.o build/temp.linux-x86_64-cpython-39/src/_igraph/common.o build/temp.linux-x86_64-cpython-39/src/_igraph/convert.o build/temp.linux-x86_64-cpython-39/src/_igraph/dfsiter.o build/temp.linux-x86_64-cpython-39/src/_igraph/edgeobject.o build/temp.linux-x86_64-cpython-39/src/_igraph/edgeseqobject.o build/temp.linux-x86_64-cpython-39/src/_igraph/error.o build/temp.linux-x86_64-cpython-39/src/_igraph/filehandle.o build/temp.linux-x86_64-cpython-39/src/_igraph/force_cpp_linker.o build/temp.linux-x86_64-cpython-39/src/_igraph/graphobject.o build/temp.linux-x86_64-cpython-39/src/_igraph/igraphmodule.o build/temp.linux-x86_64-cpython-39/src/_igraph/indexing.o build/temp.linux-x86_64-cpython-39/src/_igraph/operators.o build/temp.linux-x86_64-cpython-39/src/_igraph/pyhelpers.o build/temp.linux-x86_64-cpython-39/src/_igraph/random.o build/temp.linux-x86_64-cpython-39/src/_igraph/utils.o build/temp.linux-x86_64-cpython-39/src/_igraph/vertexobject.o build/temp.linux-x86_64-cpython-39/src/_igraph/vertexseqobject.o vendor/install/igraph/lib64/libigraph.a -Lvendor/install/igraph/lib64 -L/usr/local/lib64 -L/usr/local/lib -L/usr/lib64 -L/usr/lib -L/lib64 -L/lib -lm -lgomp -lpthread -o build/lib.linux-x86_64-cpython-39/igraph/_igraph.abi3.so
  lto1: internal compiler error: in dwarf2out_finish, at dwarf2out.c:31176
  Please submit a full bug report,
  with preprocessed source if appropriate.
  See <http://bugzilla.redhat.com/bugzilla> for instructions.
  lto-wrapper: fatal error: /opt/rh/devtoolset-8/root/usr/bin/g++ returned 1 exit status
  compilation terminated.
  /opt/rh/devtoolset-8/root/usr/libexec/gcc/x86_64-redhat-linux/8/ld: error: lto-wrapper failed
  collect2: error: ld returned 1 exit status
  error: command '/opt/rh/devtoolset-8/root/usr/bin/g++' failed with exit code 1
  error: subprocess-exited-with-error

  × Building wheel for igraph (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> See above for output.

To reproduce
using pypa manylinux_2010 image
works under manylinux_2014 image.

failure (latest setuptools >= 72.2.0)

[root@a9039e2356a2 /]# /tmp/test-igraph/bin/pip install igraph

success (last working setuptools)

[root@a9039e2356a2 /]# echo "setuptools==72.1.0" > constraints.txt
[root@a9039e2356a2 /]# PIP_CONSTRAINT=constraints.txt /tmp/test-igraph/bin/pip install igraph

Version information
0.11.6

@ntamas
Copy link
Member

ntamas commented Aug 30, 2024

Seems like a gcc bug to me (after all, the compiler seems to crash: internal compiler error: in dwarf2out_finish, at dwarf2out.c:31176). Setuptools might have triggered the bug by changing some compiler flags between 72.1.0 and 72.2.0 but is probably not the root cause of the issue. Diffing the full command line that setuptools uses to invoke gcc in the failing step might give some clues about what goes wrong.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants