DESCRIPTION

Package: sumrep
Type: Package
Version: 0.0.0.9000
Date: 2019-11-19
Authors@R: c(person("Branden", "Olson", email="brando6@uw.edu", role=c("aut", "cre")),
             person("Frederick", "Matsen", email="ematsen@gmail.com", role=c("ctb")),
             person("Jason", "Vander Heiden", email="vanderheiden.jason@gene.com", role=c("ctb")))
Title: Summary statistics for B cell receptor (BCR) repertoires
Description: What the package does (one paragraph).
URL: https://github.com/matsengrp/sumrep
BugReports: https://github.com/matsengrp/sumrep/issues
License: TBD
LazyData: true
BuildVignettes: true
VignetteBuilder: knitr
Encoding: UTF-8
SystemRequirements: Python 2.7
biocViews:
Depends: 
    R (>= 3.3.3),
    ggplot2 (>= 3.2.0)
Imports:
    alakazam (>= 0.3.0),
    ape,
    Biostrings,
    CollessLike,
    crayon,
    data.table,
    dplyr (>= 0.8.1),
    entropy,
    glmnet,
    grid,
    jsonlite,
    magrittr,
    methods,
    Peptides,
    plotmo,
    seqinr,
    shazam (>= 0.2.1),
    stringdist,
    stringr,
    stats,
    textmineR,
    utils,
    yaml
Suggests: 
    knitr,
    rmarkdown,
    testthat
RoxygenNote: 7.2.0
Collate: 
    'Approximation.R'
    'Compare.R'
    'DivergenceFunctions.R'
    'HDMD_FactorTransform.R'
    'HelperFunctions.R'
    'IGoRFunctions.R'
    'IgBlastFunctions.R'
    'PartisFunctions.R'
    'SumRep.R'
    'SummaryStats.R'