1.2.2 (2024-10-26)
- chembl (e0b7620)
1.2.1 (2024-10-26)
- chembl and file inputs (499b298)
1.2.0 (2024-10-26)
- new input methods (0f13632)
1.1.1 (2024-10-20)
1.1.0 (2024-10-20)
1.0.2 (2024-07-24)
- revert base.config and fix micromono (cd9257e)
1.0.1 (2024-07-24)
- update actino,streptomyces config (172e72c)
- update hmm sources, update streptomyces config (64f18c4)
1.0.0 (2024-07-24)
- release 1.0.0 (a8dbf88)
0.5.7 (2024-07-24)
0.5.6 (2024-07-24)
- docker workflow (9c11c85)
0.5.5 (2024-07-24)
- docker workflow (8ea2bdc)
0.5.4 (2024-07-24)
- docker versions (6c90f74)
0.5.3 (2024-07-24)
0.5.2 (2024-07-24)
- dockerfile build (13d77fb)
- release 0.5.2 (9ecdf32)
0.5.1 (2024-07-24)
- dockerfile build (5e421b4)
0.5.0 (2024-07-24)
- annotate fna input with prokka (514d1c6)
- release 0.5.0 (15aad25)
0.4.5 (2024-06-21)
- release 0.4.5 (cde59ae)
0.4.4 (2024-02-22)
0.4.3 (2024-02-22)
- alpine doesn't play well with aws/nextflow (8bfc30a)
- docker container specification (65f2d7d)
- ncbi datasets renaming (fb4bb7e)
- orthologs.config (e50dafd)
- params.antismash_fulljson (d2e4348)
- restore storeDir, was issue with alpine based container (93c77c9)
- update schema (ed493ee)
0.4.2 (2023-12-08)
0.4.1 (2023-11-18)
- change from tar to gz (7dde2fd)
0.4.0 (2023-11-18)
- antismash 7 (8178835)
- deprecate 6.1 antismash (bda70d0)
0.3.12 (2023-11-17)
- hmmparse (4c771b9)
0.3.11 (2023-11-17)
- update hmmsearch parsing (7cc82b0)
0.3.10 (2023-11-17)
- release 0.3.10 (2a06777)
0.3.9 (2023-11-17)
- . (227eed0)
- add control for HMMSEARCH_IEVALUE in hmmsearch parse (0b5cf04)
- add job length to hcondor stdout (a3741db)
- add std cov for mmseqs (9745704)
- switch ncbi ftp to https (7c3eb17)
0.3.8 (2023-11-10)
- add option to not store antismash tar (63ab839)
0.3.7 (2023-11-10)
- slurm overwrite in custom configs (f13c77f)
0.3.6 (2023-11-10)
- release 0.3.6 (b569cea)
0.3.5 (2023-11-10)
0.3.4 (2023-11-10)
- move antismash cpus and mem to config (1a74e81)
- prevent antismash from erroring on seqs w/o proteins (f7065d0)
- remove and comment out currently unused computation (7677748)
- update strep config (ddd2299)
0.3.3 (2023-11-09)
- neo4j docker Java must be pinned to jdk 17 (25c0f32)
- rm datasets file input, and fix version output since it changed in v15 (d2c4d90)
0.3.2 (2023-11-08)
- release-please (682a161)
- release 0.3.2 (53f839f)
0.3.1 (2023-11-08)
0.3.0 (2023-11-08)
0.2.6 (2023-10-14)
- update ncbi dataset cli (e3af2b8)
0.2.5 (2023-08-30)
- args in mmseqs and change to comma-delimited (5963bc7)
- mac compatibility (e968c7b)
- output an empty conf directory (dce91cc)
0.2.4 (2023-07-03)
- fix configs for nf-tower use (364a40d)
0.2.3 (2023-07-03)
- null hmmlist (e65d199)
0.2.2 (2023-07-03)
- remove unused protein_info_table (be4cb0d)
0.2.1 (2023-07-03)
- bump sgpy version (186c4b1)
0.2.0 (2023-07-03)
0.1.7 (2023-07-03)
- bump sgpy (6e3d05d)
0.1.6 (2023-07-02)
0.1.5 (2023-06-22)
0.1.4 (2023-06-22)
0.1.3 (2023-06-21)
- bump sgpy (99896f6)
0.1.2 (2023-06-21)
0.1.1 (2023-06-21)
- python code for antismash.jsonl (b97d5a2)
0.1.0 (2023-06-21)
0.0.6 (2023-06-21)
0.0.5 (2023-06-19)
- bump (48a2b96)
0.0.4 (2023-06-19)
0.0.3 (2023-06-17)
0.0.2 (2023-06-16)
- change ncbi-genome-download docker (295606b)
- loosen accessory version pins in sgpy base docker (ca94c3e)
- ncbi-genome-download error (f881373)
- socialgene is now on PyPI (82af357)
- release 0.0.1 (9d1cf65)