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examples: Add Binder-compatible Jupyter notebook example
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README.md |
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# -*- mode: dockerfile -*- | ||
# vi: set ft=dockerfile : | ||
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FROM ubuntu:18.04 | ||
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ARG NB_USER=jovyan | ||
ARG NB_UID=1000 | ||
ARG NB_GID=100 | ||
EXPOSE 7000/tcp | ||
EXPOSE 8888/tcp | ||
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RUN export DEBIAN_FRONTEND=noninteractive \ | ||
&& apt-get update \ | ||
&& apt-get install -y --no-install-recommends \ | ||
-o Dpkg::Options::=--force-confdef -o Dpkg::Options::=--force-confnew \ | ||
-o Dpkg::Use-Pty=0 \ | ||
jupyter-notebook \ | ||
locales \ | ||
python3-pip \ | ||
python3-setuptools \ | ||
wget \ | ||
&& rm -rf /var/lib/apt/lists/* \ | ||
&& locale-gen en_US.UTF-8 | ||
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# Install later version of castxml. | ||
# See README here: https://github.com/CastXML/CastXMLSuperbuild/tree/75ec9ef4ad48ddab605627d783bfdee57fd7bcbf | ||
# This is v0.3.4 for Linux: https://data.kitware.com/#item/5ee7eb659014a6d84ec1f25c | ||
RUN wget https://data.kitware.com/api/v1/file/5ee7eb659014a6d84ec1f25e/download -O /tmp/castxml.tar.gz \ | ||
&& tar xfz /tmp/castxml.tar.gz -C /usr/local --strip-components 1 \ | ||
&& rm /tmp/castxml.tar.gz | ||
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# Install common C++ libraries for experimenting. These are not necessary to | ||
# use pygccxml itself. | ||
RUN export DEBIAN_FRONTEND=noninteractive \ | ||
&& apt-get update \ | ||
&& apt-get install -y --no-install-recommends \ | ||
-o Dpkg::Options::=--force-confdef -o Dpkg::Options::=--force-confnew \ | ||
-o Dpkg::Use-Pty=0 \ | ||
libeigen3-dev \ | ||
libstdc++-7-dev \ | ||
&& rm -rf /var/lib/apt/lists/* | ||
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RUN useradd -d "/home/$NB_USER" -G $NB_GID -mU -s /bin/bash "$NB_USER" | ||
ENV HOME="/home/$NB_USER" \ | ||
LANG=en_US.UTF-8 \ | ||
LANGUAGE=en_US.UTF-8 \ | ||
LC_ALL=en_US.UTF-8 \ | ||
SHELL=/bin/bash \ | ||
USER="$NB_USER" | ||
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WORKDIR $HOME | ||
RUN mkdir pygccxml | ||
COPY ["/", "pygccxml/"] | ||
RUN chown -R $NB_UID:$NB_GID \ | ||
"$HOME/pygccxml" | ||
USER "$NB_USER" | ||
RUN pip3 --no-cache-dir install -e ./pygccxml | ||
CMD ["jupyter", "notebook", "--ip", "0.0.0.0", "pygccxml/docs/examples/notebook/example.ipynb"] |
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# Docker Image for Binder | ||
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<!-- | ||
This is derived from the following setup: | ||
https://github.com/RobotLocomotion/drake/tree/dc2a9394d/.binder | ||
--> | ||
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*Note that due to Binder conventions, this directory MUST always be in the root | ||
of the repository and named either `binder` or `.binder`. This image is NOT | ||
intended for use by most developers or users.* | ||
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To create a Docker image and run a Docker container similar to those used by | ||
[Binder](https://mybinder.org) for local debugging purposes, execute the | ||
following `pull`, `build`, and `run` commands from the top level of this Git | ||
repository: | ||
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```bash | ||
cd pygccxml | ||
docker build -f .binder/Dockerfile -t binder . | ||
docker run --rm -it --name mybinder -p 8888:8888 binder | ||
``` | ||
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Copy and paste the URL (including the login token) that is displayed in the | ||
terminal into the web browser of your choice. | ||
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To stop the running container, simply exit it from the terminal with Ctrl+C. | ||
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*Note*: If you want to test the Docker image with the current source tree | ||
(without copying, so you can modify source files), add the arguments | ||
`-v ${PWD}:/home/jovyan/pygccxml` to mount it directly. |
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.gitignore |
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"# Example pygccxml notebook on Binder\n", | ||
"\n", | ||
"Running this notebook on Binder allows you to execute the code online.\n", | ||
"\n", | ||
"Please note that provisioning may take about 1-2 minutes.\n", | ||
"\n", | ||
"<a target=\"_doc\" href=\"https://mybinder.org/v2/gh/EricCousineau-TRI/pygccxml/feature-py-notebook-example?filepath=pygccxml/docs/examples/notebook/example.ipynb\">\n", | ||
" <img src=\"https://mybinder.org/badge_logo.svg\"/>\n", | ||
"</a>\n", | ||
"\n", | ||
"The following example shows an example usage of `pygccxml` on Ubuntu\n", | ||
"Bionic, from within a Docker container, for a simple toy C++ API that\n", | ||
"uses both `std::vector` and `Eigen::Matrix<>`. The code is defined inline." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"from pygccxml import declarations\n", | ||
"from pygccxml import utils\n", | ||
"from pygccxml import parser" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# Find out the c++ parser. This should resolve to the castxml\n", | ||
"# version installed in Docker.\n", | ||
"generator_path, generator_name = utils.find_xml_generator()\n", | ||
"\n", | ||
"# Configure the xml generator\n", | ||
"config = parser.xml_generator_configuration_t(\n", | ||
" xml_generator_path=generator_path,\n", | ||
" xml_generator=generator_name,\n", | ||
" include_paths=[\"/usr/include/eigen3\"],\n", | ||
" # TODO(eric.cousineau): Why is `compiler_path` necessary?\n", | ||
" compiler_path=generator_path,\n", | ||
")" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"code = r\"\"\"\n", | ||
"#include <vector>\n", | ||
"\n", | ||
"#include <Eigen/Dense>\n", | ||
"\n", | ||
"namespace ns {\n", | ||
"\n", | ||
"template <typename T, typename U = int>\n", | ||
"class ExampleClass {\n", | ||
"public:\n", | ||
" std::vector<T> make_std_vector() const;\n", | ||
" Eigen::Matrix<U, 3, 3> make_matrix3();\n", | ||
"};\n", | ||
"\n", | ||
"// Analyze concrete instantiations of the given class.\n", | ||
"extern template class ExampleClass<int>;\n", | ||
"extern template class ExampleClass<float, float>;\n", | ||
"\n", | ||
"} // namespace ns\n", | ||
"\"\"\"\n", | ||
"\n", | ||
"(global_ns,) = parser.parse_string(code, config)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"scrolled": false | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"ns = global_ns.namespace(\"ns\")\n", | ||
"declarations.print_declarations([ns])" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"# Retrieve an instantiation and show template parameters.\n", | ||
"cls, = ns.classes('ExampleClass<float, float>')\n", | ||
"declarations.templates.split(cls.name)" | ||
] | ||
} | ||
], | ||
"metadata": { | ||
"kernelspec": { | ||
"display_name": "Python 3", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"codemirror_mode": { | ||
"name": "ipython", | ||
"version": 3 | ||
}, | ||
"file_extension": ".py", | ||
"mimetype": "text/x-python", | ||
"name": "python", | ||
"nbconvert_exporter": "python", | ||
"pygments_lexer": "ipython3", | ||
"version": "3.6.9" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 4 | ||
} |