Split sources into poly/templ/tool prefixes

DCM-UPB · Apr 19, 2019 · 948150c · 948150c
1 parent 106cb45
commit 948150c
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Showing 121 changed files with 218 additions and 218 deletions.
diff --git a/benchmark/bench_actfs_derivs/main.cpp b/benchmark/bench_actfs_derivs/main.cpp
@@ -2,7 +2,7 @@
 #include <iostream>
 #include <random>
 
-#include "qnets/actf/ActivationFunctionManager.hpp"
+#include "qnets/poly/actf/ActivationFunctionManager.hpp"
 
 #include "FFNNBenchmarks.hpp"
 

diff --git a/benchmark/bench_actfs_ffprop/main.cpp b/benchmark/bench_actfs_ffprop/main.cpp
@@ -2,8 +2,8 @@
 #include <iostream>
 #include <random>
 
-#include "qnets/actf/ActivationFunctionManager.hpp"
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/actf/ActivationFunctionManager.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 #include "FFNNBenchmarks.hpp"
 

diff --git a/benchmark/bench_nunits_ffprop/main.cpp b/benchmark/bench_nunits_ffprop/main.cpp
@@ -2,7 +2,7 @@
 #include <iostream>
 #include <random>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 #include "FFNNBenchmarks.hpp"
 

diff --git a/benchmark/common/FFNNBenchmarks.hpp b/benchmark/common/FFNNBenchmarks.hpp
@@ -3,7 +3,7 @@
 #include <tuple>
 
 #include "Timer.hpp"
-#include "qnets/FeedForwardNeuralNetwork.hpp"
+#include "qnets/poly/FeedForwardNeuralNetwork.hpp"
 
 inline double benchmark_FFPropagate(FeedForwardNeuralNetwork * const ffnn, const double * const xdata, const int neval)
 {

diff --git a/examples/ex_actf/main.cpp b/examples/ex_actf/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 class MyActivationFunction: public ActivationFunctionInterface

diff --git a/examples/ex_basic/main.cpp b/examples/ex_basic/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/examples/ex_beta/main.cpp b/examples/ex_beta/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/examples/ex_features/main.cpp b/examples/ex_features/main.cpp
@@ -2,7 +2,7 @@
 #include <iostream>
 #include <random>
 
-#include "qnets/train/NNTrainerGSL.hpp"
+#include "qnets/poly/train/NNTrainerGSL.hpp"
 
 
 /*

diff --git a/examples/ex_fit/main.cpp b/examples/ex_fit/main.cpp
@@ -2,7 +2,7 @@
 #include <iostream>
 #include <random>
 
-#include "qnets/train/NNTrainerGSL.hpp"
+#include "qnets/poly/train/NNTrainerGSL.hpp"
 
 
 /*

diff --git a/examples/ex_loadfile/main.cpp b/examples/ex_loadfile/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/examples/ex_plot/main.cpp b/examples/ex_plot/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/examples/ex_propagate/main.cpp b/examples/ex_propagate/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/examples/ex_vderiv/main.cpp b/examples/ex_vderiv/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/examples/ex_xderiv/main.cpp b/examples/ex_xderiv/main.cpp
@@ -2,7 +2,7 @@
 #include <fstream>
 #include <iostream>
 
-#include "qnets/io/PrintUtilities.hpp"
+#include "qnets/poly/io/PrintUtilities.hpp"
 
 
 int main()

diff --git a/include/qnets/FeedForwardNeuralNetwork.hpp → ...e/qnets/poly/FeedForwardNeuralNetwork.hpp b/include/qnets/FeedForwardNeuralNetwork.hpp → ...e/qnets/poly/FeedForwardNeuralNetwork.hpp
@@ -1,14 +1,14 @@
 #ifndef FFNN_NET_FEEDFORWARDNEURALNETWORK_HPP
 #define FFNN_NET_FEEDFORWARDNEURALNETWORK_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
-#include "qnets/fmap/FeatureMapLayer.hpp"
-#include "qnets/layer/FedLayer.hpp"
-#include "qnets/layer/InputLayer.hpp"
-#include "qnets/layer/NNLayer.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
-#include "qnets/layer/OutputNNLayer.hpp"
-#include "qnets/unit/NetworkUnit.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/fmap/FeatureMapLayer.hpp"
+#include "qnets/poly/layer/FedLayer.hpp"
+#include "qnets/poly/layer/InputLayer.hpp"
+#include "qnets/poly/layer/NNLayer.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
+#include "qnets/poly/layer/OutputNNLayer.hpp"
+#include "qnets/poly/unit/NetworkUnit.hpp"
 
 #include <cstddef>
 #include <string>

diff --git a/...nets/actf/ActivationFunctionInterface.hpp → ...poly/actf/ActivationFunctionInterface.hpp b/...nets/actf/ActivationFunctionInterface.hpp → ...poly/actf/ActivationFunctionInterface.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_ACTIVATIONFUNCTIONINTERFACE_HPP
 #define FFNN_ACTF_ACTIVATIONFUNCTIONINTERFACE_HPP
 
-#include "qnets/serial/SerializableComponent.hpp"
+#include "qnets/poly/serial/SerializableComponent.hpp"
 
 #include <cmath>
 #include <string>

diff --git a/.../qnets/actf/ActivationFunctionManager.hpp → ...s/poly/actf/ActivationFunctionManager.hpp b/.../qnets/actf/ActivationFunctionManager.hpp → ...s/poly/actf/ActivationFunctionManager.hpp
@@ -2,16 +2,16 @@
 #define FFNN_ACTF_ACTIVATIONFUNCTIONMANAGER_HPP
 
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
-#include "qnets/actf/ExponentialActivationFunction.hpp"
-#include "qnets/actf/GaussianActivationFunction.hpp"
-#include "qnets/actf/IdentityActivationFunction.hpp"
-#include "qnets/actf/LogisticActivationFunction.hpp"
-#include "qnets/actf/ReLUActivationFunction.hpp"
-#include "qnets/actf/SELUActivationFunction.hpp"
-#include "qnets/actf/SRLUActivationFunction.hpp"
-#include "qnets/actf/SineActivationFunction.hpp"
-#include "qnets/actf/TanSigmoidActivationFunction.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ExponentialActivationFunction.hpp"
+#include "qnets/poly/actf/GaussianActivationFunction.hpp"
+#include "qnets/poly/actf/IdentityActivationFunction.hpp"
+#include "qnets/poly/actf/LogisticActivationFunction.hpp"
+#include "qnets/poly/actf/ReLUActivationFunction.hpp"
+#include "qnets/poly/actf/SELUActivationFunction.hpp"
+#include "qnets/poly/actf/SRLUActivationFunction.hpp"
+#include "qnets/poly/actf/SineActivationFunction.hpp"
+#include "qnets/poly/actf/TanSigmoidActivationFunction.hpp"
 
 #include <string>
 #include <vector>

diff --git a/...ts/actf/ExponentialActivationFunction.hpp → ...ly/actf/ExponentialActivationFunction.hpp b/...ts/actf/ExponentialActivationFunction.hpp → ...ly/actf/ExponentialActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_EXPONENTIALACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_EXPONENTIALACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 class ExponentialActivationFunction: public ActivationFunctionInterface

diff --git a/...qnets/actf/GaussianActivationFunction.hpp → .../poly/actf/GaussianActivationFunction.hpp b/...qnets/actf/GaussianActivationFunction.hpp → .../poly/actf/GaussianActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_GAUSSIANACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_GAUSSIANACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 

diff --git a/...qnets/actf/IdentityActivationFunction.hpp → .../poly/actf/IdentityActivationFunction.hpp b/...qnets/actf/IdentityActivationFunction.hpp → .../poly/actf/IdentityActivationFunction.hpp
@@ -2,7 +2,7 @@
 #define FFNN_ACTF_IDENTITYACTIVATIONFUNCTION_HPP
 
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 class IdentityActivationFunction: public ActivationFunctionInterface

diff --git a/...qnets/actf/LogisticActivationFunction.hpp → .../poly/actf/LogisticActivationFunction.hpp b/...qnets/actf/LogisticActivationFunction.hpp → .../poly/actf/LogisticActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_LOGISTICACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_LOGISTICACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 class LogisticActivationFunction: public ActivationFunctionInterface

diff --git a/...ude/qnets/actf/ReLUActivationFunction.hpp → ...nets/poly/actf/ReLUActivationFunction.hpp b/...ude/qnets/actf/ReLUActivationFunction.hpp → ...nets/poly/actf/ReLUActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_RELUACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_RELUACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 

diff --git a/...ude/qnets/actf/SELUActivationFunction.hpp → ...nets/poly/actf/SELUActivationFunction.hpp b/...ude/qnets/actf/SELUActivationFunction.hpp → ...nets/poly/actf/SELUActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_SELUACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_SELUACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 class SELUActivationFunction: public ActivationFunctionInterface

diff --git a/...ude/qnets/actf/SRLUActivationFunction.hpp → ...nets/poly/actf/SRLUActivationFunction.hpp b/...ude/qnets/actf/SRLUActivationFunction.hpp → ...nets/poly/actf/SRLUActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_SRLUACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_SRLUACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 // Smooth Rectified Linear Unit ( == ln(1+exp(x)) )

diff --git a/...ude/qnets/actf/SineActivationFunction.hpp → ...nets/poly/actf/SineActivationFunction.hpp b/...ude/qnets/actf/SineActivationFunction.hpp → ...nets/poly/actf/SineActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_SINEACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_SINEACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 

diff --git a/...ets/actf/TanSigmoidActivationFunction.hpp → ...oly/actf/TanSigmoidActivationFunction.hpp b/...ets/actf/TanSigmoidActivationFunction.hpp → ...oly/actf/TanSigmoidActivationFunction.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_ACTF_TANSIGMOIDACTIVATIONFUNCTION_HPP
 #define FFNN_ACTF_TANSIGMOIDACTIVATIONFUNCTION_HPP
 
-#include "qnets/actf/ActivationFunctionInterface.hpp"
+#include "qnets/poly/actf/ActivationFunctionInterface.hpp"
 #include <string>
 
 

diff --git a/include/qnets/feed/FeederInterface.hpp → include/qnets/poly/feed/FeederInterface.hpp b/include/qnets/feed/FeederInterface.hpp → include/qnets/poly/feed/FeederInterface.hpp
@@ -1,7 +1,7 @@
 #ifndef FFNN_FEED_FEEDERINTERFACE_HPP
 #define FFNN_FEED_FEEDERINTERFACE_HPP
 
-#include "qnets/serial/SerializableComponent.hpp"
+#include "qnets/poly/serial/SerializableComponent.hpp"
 
 #include <stdexcept>
 #include <string>

diff --git a/include/qnets/feed/NNRay.hpp → include/qnets/poly/feed/NNRay.hpp b/include/qnets/feed/NNRay.hpp → include/qnets/poly/feed/NNRay.hpp
@@ -1,8 +1,8 @@
 #ifndef FFNN_FEED_NNRAY_HPP
 #define FFNN_FEED_NNRAY_HPP
 
-#include "qnets/feed/WeightedFeeder.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
+#include "qnets/poly/feed/WeightedFeeder.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
 
 #include <string>
 

diff --git a/include/qnets/feed/SmartBetaGenerator.hpp → ...de/qnets/poly/feed/SmartBetaGenerator.hpp b/include/qnets/feed/SmartBetaGenerator.hpp → ...de/qnets/poly/feed/SmartBetaGenerator.hpp
@@ -1,10 +1,10 @@
 #ifndef FFNN_FEED_SMARTBETAGENERATOR_HPP
 #define FFNN_FEED_SMARTBETAGENERATOR_HPP
 
-#include "qnets/feed/FeederInterface.hpp"
-#include "qnets/feed/NNRay.hpp"
-#include "qnets/layer/FedLayer.hpp"
-#include "qnets/FeedForwardNeuralNetwork.hpp"
+#include "qnets/poly/feed/FeederInterface.hpp"
+#include "qnets/poly/feed/NNRay.hpp"
+#include "qnets/poly/layer/FedLayer.hpp"
+#include "qnets/poly/FeedForwardNeuralNetwork.hpp"
 
 
 namespace smart_beta

diff --git a/include/qnets/feed/StaticFeeder.hpp → include/qnets/poly/feed/StaticFeeder.hpp b/include/qnets/feed/StaticFeeder.hpp → include/qnets/poly/feed/StaticFeeder.hpp
@@ -1,9 +1,9 @@
 #ifndef FFNN_FEED_STATICFEEDER_HPP
 #define FFNN_FEED_STATICFEEDER_HPP
 
-#include "qnets/feed/FeederInterface.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
-#include "qnets/unit/NetworkUnit.hpp"
+#include "qnets/poly/feed/FeederInterface.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
+#include "qnets/poly/unit/NetworkUnit.hpp"
 
 #include <string>
 #include <vector>

diff --git a/include/qnets/feed/VariableFeeder.hpp → include/qnets/poly/feed/VariableFeeder.hpp b/include/qnets/feed/VariableFeeder.hpp → include/qnets/poly/feed/VariableFeeder.hpp
@@ -1,9 +1,9 @@
 #ifndef FFNN_FEED_VARIABLEFEEDER_HPP
 #define FFNN_FEED_VARIABLEFEEDER_HPP
 
-#include "qnets/feed/FeederInterface.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
-#include "qnets/unit/NetworkUnit.hpp"
+#include "qnets/poly/feed/FeederInterface.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
+#include "qnets/poly/unit/NetworkUnit.hpp"
 
 #include <string>
 #include <vector>

diff --git a/include/qnets/feed/WeightedFeeder.hpp → include/qnets/poly/feed/WeightedFeeder.hpp b/include/qnets/feed/WeightedFeeder.hpp → include/qnets/poly/feed/WeightedFeeder.hpp
@@ -1,9 +1,9 @@
 #ifndef FFNN_FEED_WEIGHTEDFEEDER_HPP
 #define FFNN_FEED_WEIGHTEDFEEDER_HPP
 
-#include "qnets/feed/VariableFeeder.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
-#include "qnets/unit/NetworkUnit.hpp"
+#include "qnets/poly/feed/VariableFeeder.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
+#include "qnets/poly/unit/NetworkUnit.hpp"
 
 #include <string>
 #include <vector>

diff --git a/include/qnets/fmap/ActivationMapUnit.hpp → ...ude/qnets/poly/fmap/ActivationMapUnit.hpp b/include/qnets/fmap/ActivationMapUnit.hpp → ...ude/qnets/poly/fmap/ActivationMapUnit.hpp
@@ -1,8 +1,8 @@
 #ifndef ACTIVATION_MAP_UNIT
 #define ACTIVATION_MAP_UNIT
 
-#include "qnets/unit/FedActivationUnit.hpp"
-#include "qnets/feed/FeederInterface.hpp"
+#include "qnets/poly/unit/FedActivationUnit.hpp"
+#include "qnets/poly/feed/FeederInterface.hpp"
 
 #include <stdexcept>
 #include <string>

diff --git a/include/qnets/fmap/EuclideanDistanceMap.hpp → .../qnets/poly/fmap/EuclideanDistanceMap.hpp b/include/qnets/fmap/EuclideanDistanceMap.hpp → .../qnets/poly/fmap/EuclideanDistanceMap.hpp
@@ -1,8 +1,8 @@
 #ifndef FFNN_FMAP_EUCLIDEANDISTANCEMAP_HPP
 #define FFNN_FMAP_EUCLIDEANDISTANCEMAP_HPP
 
-#include "qnets/fmap/MultiDimStaticMap.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
+#include "qnets/poly/fmap/MultiDimStaticMap.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
 
 #include <cstddef>
 #include <vector>

diff --git a/...e/qnets/fmap/EuclideanDistanceMapUnit.hpp → ...ts/poly/fmap/EuclideanDistanceMapUnit.hpp b/...e/qnets/fmap/EuclideanDistanceMapUnit.hpp → ...ts/poly/fmap/EuclideanDistanceMapUnit.hpp
@@ -1,8 +1,8 @@
 #ifndef FFNN_FMAP_EUCLIDEANDISTANCEMAPUNIT_HPP
 #define FFNN_FMAP_EUCLIDEANDISTANCEMAPUNIT_HPP
 
-#include "qnets/fmap/EuclideanDistanceMap.hpp"
-#include "qnets/fmap/FeatureMapUnit.hpp"
+#include "qnets/poly/fmap/EuclideanDistanceMap.hpp"
+#include "qnets/poly/fmap/FeatureMapUnit.hpp"
 
 #include <string>
 

diff --git a/...e/qnets/fmap/EuclideanPairDistanceMap.hpp → ...ts/poly/fmap/EuclideanPairDistanceMap.hpp b/...e/qnets/fmap/EuclideanPairDistanceMap.hpp → ...ts/poly/fmap/EuclideanPairDistanceMap.hpp
@@ -1,8 +1,8 @@
 #ifndef FFNN_FMAP_EUCLIDEANPAIRDISTANCEMAP_HPP
 #define FFNN_FMAP_EUCLIDEANPAIRDISTANCEMAP_HPP
 
-#include "qnets/fmap/MultiDimStaticMap.hpp"
-#include "qnets/layer/NetworkLayer.hpp"
+#include "qnets/poly/fmap/MultiDimStaticMap.hpp"
+#include "qnets/poly/layer/NetworkLayer.hpp"
 
 // takes coordinates on input side and calculates squared euclidean distance of a pair
 class EuclideanPairDistanceMap: public MultiDimStaticMap

diff --git a/...ets/fmap/EuclideanPairDistanceMapUnit.hpp → ...oly/fmap/EuclideanPairDistanceMapUnit.hpp b/...ets/fmap/EuclideanPairDistanceMapUnit.hpp → ...oly/fmap/EuclideanPairDistanceMapUnit.hpp
@@ -1,8 +1,8 @@
 #ifndef FFNN_FMAP_EUCLIDEANPAIRDISTANCEMAPUNIT_HPP
 #define FFNN_FMAP_EUCLIDEANPAIRDISTANCEMAPUNIT_HPP
 
-#include "qnets/fmap/EuclideanPairDistanceMap.hpp"
-#include "qnets/fmap/FeatureMapUnit.hpp"
+#include "qnets/poly/fmap/EuclideanPairDistanceMap.hpp"
+#include "qnets/poly/fmap/FeatureMapUnit.hpp"
 
 #include <string>