Insights on cross-species transmission of SARS-CoV-2 from structural modeling

Data and code archive for our work available on biorxiv.

Model Viewer

You can view the 10 best models of each species at: https://joaorodrigues.github.io/ace2-animal-models/

Contents

• modelling: homology modeling files, scripts, and results.
• notebooks: Jupyter notebooks required to reproduce figures/analyses
• refinement: HADDOCK models and analysis
• sequences/: sequences and alignments of ACE2 orthologs used in this work (mostly in FASTA format).
• scripts/: assorted scripts used to manipulate/process data.

License

Code is licensed under the MIT open-source license, while data files are under a CC-BY-NC-ND 4.0 International license. See the LICENSE.md files for details.

Contact

For questions, bugs, suggestions, and further inquiries, please leave an issue here or send the corresponding author an email at joaor [at] stanford [dot] edu