Data Acquisition

• The multimodal brain tumor datasets (BraTS 2018, BraTS 2019 & BraTS 2020) could be acquired from here.

Data Preprocess (BraTS 2018, BraTS 2019 & BraTS 2020)

After downloading the dataset from here, data preprocessing is needed which is to convert the .nii files as .pkl files and realize date normalization.

python3 preprocess.py

Training

Run the training script on BraTS dataset.

python3 train.py

Testing

If you want to test the model which has been trained on the BraTS dataset, run the testing script as following.

python3 test.py

After the testing process stops, you can upload the submission file to here for the final Dice_scores.

Citation

If you use our code or models in your work or find it is helpful, please cite the corresponding paper.

Reference

1.setr-pytorch

2.BraTS2017