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allow saving merged segments to all formats #495

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merged 3 commits into from
Apr 23, 2024
Merged

allow saving merged segments to all formats #495

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a67e64e
allow saving merged segments to all formats
fedorov Apr 22, 2024
c782574
update python to 3.10.11
fedorov Apr 23, 2024
c0bef7a
remove incorrect statement re 4D NRRD output
fedorov Apr 23, 2024
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4 changes: 2 additions & 2 deletions .github/workflows/cmake-macos.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ jobs:
fetch-tags: true
- uses: actions/setup-python@v4
with:
python-version: '3.7.14'
python-version: '3.10.11'

# Install build tools (cmake and ninja) as well as jsondiff
- name: "Install jsondiff"
Expand Down Expand Up @@ -119,4 +119,4 @@ jobs:
--prerelease-packages ${{ github.workspace }}/dcmqi-build/dcmqi-build/dcmqi-*-mac-*.tar.gz \
--prerelease-packages-clear-pattern "dcmqi-*-mac-*" \
--prerelease-packages-keep-pattern "*<COMMIT_DATE>-<COMMIT_SHORT_SHA>*" \
--exit-success-if-missing-token --token ${{ secrets.GA_TOKEN }}
--exit-success-if-missing-token --token ${{ secrets.GA_TOKEN }}
5 changes: 0 additions & 5 deletions apps/seg/segimage2itkimage.cxx
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Expand Up @@ -25,11 +25,6 @@ int main(int argc, char *argv[])
dcmtk::log4cplus::BasicConfigurator::doConfigure();
}

if (mergeSegments && outputType != "nrrd") {
std::cerr << "ERROR: mergeSegments option is only supported when output format is NRRD!" << std::endl;
return EXIT_FAILURE;
}

if(helper::isUndefinedOrPathDoesNotExist(inputSEGFileName, "Input DICOM file")
|| helper::isUndefinedOrPathDoesNotExist(outputDirName, "Output directory"))
return EXIT_FAILURE;
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