Merge pull request #100 from b-cubed-eu/add-rationale

Add rationale
b-cubed-eu · Nov 4, 2024 · 25c6a62 · 25c6a62
2 parents 2314eff + 61a0735
commit 25c6a62
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diff --git a/.zenodo.json b/.zenodo.json
@@ -1,6 +1,6 @@
 {
   "title": "gcube: Simulating Biodiversity Data Cubes",
-  "version": "0.4.0",
+  "version": "1.0.0",
   "license": "MIT",
   "upload_type": "software",
   "description": "<p>Simulation framework for biodiversity data cubes.<\/p>",

diff --git a/CITATION.cff b/CITATION.cff
@@ -25,4 +25,4 @@ abstract: "Simulation framework for biodiversity data cubes."
 identifiers:
 - type: url
   value: https://b-cubed-eu.github.io/gcube/
-version: 0.4.0
+version: 1.0.0
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: gcube
 Title: Simulating Biodiversity Data Cubes
-Version: 0.4.0
+Version: 1.0.0
 Authors@R: c(
     person("Ward", "Langeraert", , "[email protected]", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0002-5900-8109", affiliation = "Research Institute for Nature and Forest (INBO)")),

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,7 @@
+# gcube 1.0.0
+
+* Add package origin story.
+
 # gcube 0.4.0
 
 *	Consolidate documentation across all functions, README, and vignettes.

diff --git a/README.Rmd b/README.Rmd
@@ -40,9 +40,11 @@ You can install the development version from [GitHub](https://github.com/) with:
 remotes::install_github("b-cubed-eu/gcube")
 ```
 
-## Package name rationale
+## Package name rationale and origin story
 
-The name **gcube** stands for 'generate cube' since it can be used to generate biodiversity data cubes from minimal input.
+The name **gcube** stands for "generate cube" since it can be used to generate biodiversity data cubes from minimal input.
+It was first developed during the hackathon "Hacking Biodiversity Data Cubes for Policy", where it won the first price in the category "Visualization and training".
+You can read the full story here: <https://doi.org/10.37044/osf.io/vcyr7>
 
 ## Example
 

diff --git a/README.md b/README.md
@@ -41,10 +41,14 @@ You can install the development version from
 remotes::install_github("b-cubed-eu/gcube")
 ```
 
-## Package name rationale
-
-The name **gcube** stands for ‘generate cube’ since it can be used to
-generate biodiversity data cubes from minimal input.
+## Package name rationale and origin story
+
+The name **gcube** stands for “generate cube” since it can be used to
+generate biodiversity data cubes from minimal input. It was first
+developed during the hackathon “Hacking Biodiversity Data Cubes for
+Policy”, where it won the first price in the category “Visualization and
+training”. You can read the full story here:
+<https://doi.org/10.37044/osf.io/vcyr7>
 
 ## Example
 

diff --git a/codemeta.json b/codemeta.json
@@ -8,7 +8,7 @@
   "codeRepository": "https://github.com/b-cubed-eu/gcube",
   "issueTracker": "https://github.com/b-cubed-eu/gcube/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "0.4.0",
+  "version": "1.0.0",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -130,113 +130,50 @@
     {
       "@type": "SoftwareApplication",
       "identifier": "ggExtra",
-      "name": "ggExtra",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=ggExtra"
+      "name": "ggExtra"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "ggplot2",
-      "name": "ggplot2",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=ggplot2"
+      "name": "ggplot2"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "knitr",
-      "name": "knitr",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=knitr"
+      "name": "knitr"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "rmarkdown",
-      "name": "rmarkdown",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=rmarkdown"
+      "name": "rmarkdown"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "testthat",
       "name": "testthat",
-      "version": ">= 3.0.0",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=testthat"
+      "version": ">= 3.0.0"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "tidyterra",
-      "name": "tidyterra",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=tidyterra"
+      "name": "tidyterra"
     }
   ],
   "softwareRequirements": {
     "1": {
       "@type": "SoftwareApplication",
       "identifier": "assertthat",
-      "name": "assertthat",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=assertthat"
+      "name": "assertthat"
     },
     "2": {
       "@type": "SoftwareApplication",
       "identifier": "dplyr",
-      "name": "dplyr",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=dplyr"
+      "name": "dplyr"
     },
     "3": {
       "@type": "SoftwareApplication",
       "identifier": "gstat",
-      "name": "gstat",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=gstat"
+      "name": "gstat"
     },
     "4": {
       "@type": "SoftwareApplication",
@@ -246,50 +183,22 @@
     "5": {
       "@type": "SoftwareApplication",
       "identifier": "mnormt",
-      "name": "mnormt",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=mnormt"
+      "name": "mnormt"
     },
     "6": {
       "@type": "SoftwareApplication",
       "identifier": "purrr",
-      "name": "purrr",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=purrr"
+      "name": "purrr"
     },
     "7": {
       "@type": "SoftwareApplication",
       "identifier": "rlang",
-      "name": "rlang",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=rlang"
+      "name": "rlang"
     },
     "8": {
       "@type": "SoftwareApplication",
       "identifier": "sf",
-      "name": "sf",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=sf"
+      "name": "sf"
     },
     "9": {
       "@type": "SoftwareApplication",
@@ -299,42 +208,21 @@
     "10": {
       "@type": "SoftwareApplication",
       "identifier": "terra",
-      "name": "terra",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=terra"
+      "name": "terra"
     },
     "11": {
       "@type": "SoftwareApplication",
       "identifier": "tidyr",
-      "name": "tidyr",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=tidyr"
+      "name": "tidyr"
     },
     "12": {
       "@type": "SoftwareApplication",
       "identifier": "vegan",
-      "name": "vegan",
-      "provider": {
-        "@id": "https://cran.r-project.org",
-        "@type": "Organization",
-        "name": "Comprehensive R Archive Network (CRAN)",
-        "url": "https://cran.r-project.org"
-      },
-      "sameAs": "https://CRAN.R-project.org/package=vegan"
+      "name": "vegan"
     },
     "SystemRequirements": null
   },
-  "fileSize": "555.681KB",
+  "fileSize": "557.326KB",
   "citation": [
     {
       "@type": "SoftwareSourceCode",
@@ -346,7 +234,7 @@
           "familyName": "Langeraert"
         }
       },
-      "name": "gcube: Simulating Biodiversity Data Cubes. Version 0.4.0",
+      "name": "gcube: Simulating Biodiversity Data Cubes. Version 1.0.0",
       "url": "https://b-cubed-eu.github.io/gcube/"
     }
   ],

diff --git a/inst/CITATION b/inst/CITATION
@@ -2,12 +2,12 @@ citHeader("To cite `gcube` in publications please use:")
 # begin checklist entry
 bibentry(
   bibtype = "Manual",
-  title = "gcube: Simulating Biodiversity Data Cubes. Version 0.4.0",
+  title = "gcube: Simulating Biodiversity Data Cubes. Version 1.0.0",
   author = c( author = c(person(given = "Ward", family = "Langeraert"))),
   year = 2024,
   url = "https://b-cubed-eu.github.io/gcube/",
   abstract = "Simulation framework for biodiversity data cubes.",
-  textVersion = "Langeraert, Ward (2024) gcube: Simulating Biodiversity Data Cubes. Version 0.4.0. https://b-cubed-eu.github.io/gcube/",
+  textVersion = "Langeraert, Ward (2024) gcube: Simulating Biodiversity Data Cubes. Version 1.0.0. https://b-cubed-eu.github.io/gcube/",
   keywords = "simulation; data cubes; B-Cubed; biodiversity; Monte-Carlo",
 )
 # end checklist entry
diff --git a/inst/en_gb.dic b/inst/en_gb.dic
@@ -2,8 +2,6 @@
 CMD
 SpatRaster
 codecov
-cube’
-cube’
 det
 etc
 prob
-Original file line number
+Diff line change
@@ Expand Up / @@ -2,8 +2,6 @@ @@
     CMD
     SpatRaster
     codecov
-    cube’
-    cube’
     det
     etc
     prob
@@ Expand Down @@