Add prefix: metacyc.pathway

src/bioregistry/data/bioregistry.json

@@ -57787,6 +57787,12 @@
       "prefix": "MetaCyc",
       "uri_format": "http://translator.ncats.nih.gov/MetaCyc_$1"
     },
+    "contact": {
+      "email": "[email protected]",
+      "github": "pkarp111",
+      "name": "Peter Karp",
+      "orcid": "0000-0002-5876-6418"
+    },
     "fairsharing": {
       "abbreviation": null,
       "description": "MetaCyc is the largest curated collection of metabolic pathways currently available. It provides a comprehensive resource for metabolic pathways and enzymes from all domains of life. The pathways in MetaCyc are experimentally determined, small-molecule metabolic pathways, and are curated from the primary scientific literature. Most reactions in MetaCyc pathways are linked to one or more well-characterized enzymes, and both pathways and enzymes are annotated with reviews, evidence codes, and literature citations.  As of 2022 MetaCyc describes 3,000 pathways and 17,000 reactions curated from 71,000 publications.\n",
@@ -57900,6 +57906,48 @@
       "MetaCyc"
     ]
   },
+  "metacyc.pathway": {
+    "contact": {
+      "email": "[email protected]",
+      "github": "pkarp111",
+      "name": "Peter Karp",
+      "orcid": "0000-0002-5876-6418"
+    },
+    "contributor": {
+      "github": "hrshdhgd",
+      "name": "Harshad Hegde",
+      "orcid": "0000-0002-2411-565X"
+    },
+    "description": "MetaCyc is a database of non-redundant, experimentally elucidated metabolic pathways and enzymes. It also contains reactions, chemical compounds, and genes. It stores predominantly qualitative information rather than quantitative data, although it does contain some quantitative data such as enzyme kinetics data.\n\nMetaCyc is [curated](http://www.biocyc.org/glossary.shtml?sid=biocyc14-3908554027#Curation) from the scientific experimental literature according to an [extensive process](https://metacyc.org/MetaCycUserGuide.shtml#TAG:__tex2page_sec_4)]. The majority of pathways occurring in it are from microorganisms and plants. MetaCyc stores thousands of additional enzyme-catalyzed reactions that have not yet been assigned an EC number",
+    "example": "12DICHLORETHDEG-PWY",
+    "github_request_issue": 1012,
+    "homepage": "https://metacyc.org",
+    "name": "Metabolic Encyclopedia for Pathway/Genome Databases",
+    "publications": [
+      {
+        "pubmed": "31586394",
+        "title": "The MetaCyc database of metabolic pathways and enzymes - a 2019 update",
+        "year": 2019
+      },
+      {
+        "pubmed": "23746312",
+        "title": "The challenge of constructing, classifying, and representing metabolic pathways",
+        "year": 2013
+      },
+      {
+        "pubmed": "21523460",
+        "title": "A survey of metabolic databases emphasizing the MetaCyc family",
+        "year": 2011
+      }
+    ],
+    "reviewer": {
+      "email": "[email protected]",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "uri_format": "https://metacyc.org/META/NEW-IMAGE?object=$1"
+  },
   "metacyc.reaction": {
     "biocontext": {
       "prefix": "METACYC.REACTION"
@@ -57910,6 +57958,12 @@
       "prefix": "metacyc.reaction",
       "uri_format": "http://identifiers.org/metacyc.reaction:$1"
     },
+    "contact": {
+      "email": "[email protected]",
+      "github": "pkarp111",
+      "name": "Peter Karp",
+      "orcid": "0000-0002-5876-6418"
+    },
     "mappings": {
       "biocontext": "METACYC.REACTION",
       "biolink": "metacyc.reaction",