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run-script vault fix, add run-script --no-deps option #72

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erithmetic
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This PR combines two different changes:

  1. The no-deps change, which I want to have a design discussion about before merging.
  2. The should_output_project project change, which we've discussed previously, and which I strongly suspect is an incorrect solution here. This is going to require me to re-read a bunch of code very carefully, and the patch will need a commit message justifying why the chosen solution is the correct one. The underlying issue may be a bug elsewhere in cage's design, and I'd prefer to fix it there.

Please consider splitting out these two patches into separate PRs so we can discuss them individually. Thank you!

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Closing in favor of #80

@erithmetic erithmetic closed this Oct 19, 2017
@erithmetic erithmetic deleted the run-script-with-vault branch October 19, 2017 21:12
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