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bfabricPy 1.13.19 #136

Merged
merged 33 commits into from
Feb 6, 2025
Merged

bfabricPy 1.13.19 #136

merged 33 commits into from
Feb 6, 2025

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leoschwarz
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@leoschwarz leoschwarz commented Feb 6, 2025 •
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The changes to the bfabric package are very minimal (app runner specific log filtering should be fixed now) but include a code reformatting.

leoschwarz and others added 30 commits January 29, 2025 16:37
@leoschwarz
bump bfabric_scripts version
2f83465
@leoschwarz
lock the version of bfabric
4a3e776
@leoschwarz
app_runner 0.0.14
1ac7d13
@leoschwarz
update installation docs
d999f06
@leoschwarz
delete old action
28e4dad
@leoschwarz
adjust name
13e654e
@leoschwarz
app_runner 0.0.15
89a63af
@leoschwarz
adjust the integration test
834ae3e
@leoschwarz
keep the name
9489b57
@leoschwarz
allow sorting by arbitrary fields, e.g. application id
ac1706e
@leoschwarz
reformat
9060d50
@leoschwarz
allow filtering by user
ce8597c
@leoschwarz
move to bfabric_app_runner in line with pypi package
07b751f
@leoschwarz
formatting
33aed70
@leoschwarz
syntax
9afee0f
@leoschwarz
remove redundant alias
995df4e
@leoschwarz
0.0.15
fb648e1
@leoschwarz
create the tag on release
95f6e99
@leoschwarz
print info always
245689a
@leoschwarz
consistent
d133121
@leoschwarz
typo
677fede
@leoschwarz
update install docs
9a485cc
@leoschwarz
fix docs
5c84f3e
@leoschwarz
add __future__.annotations
578069c
@leoschwarz
New file input (#134)
f3e93f6 
This implements a new input spec file which replaces file_scp and preserves timestamps whenever possible and allows to create symlinks instead of copying the file, as needed.
@leoschwarz
use script logging
ec5e861
@leoschwarz
optional order fasta file
2935e04
@leoschwarz
Better error when app version is not found
19949a6
@leoschwarz
correct key
ecf0cb3
@leoschwarz
impl __contains__
308e312
@leoschwarz
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leoschwarz commented Feb 6, 2025 •
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@leoschwarz leoschwarz marked this pull request as ready for review February 6, 2025 13:24
@leoschwarz leoschwarz merged commit b0c65a0 into release_bfabric Feb 6, 2025
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