Upgrade to 0.0.5 apiVersion and some minor changes

• Updates the apiVersion on all data sources to 0.0.5.
• Updates the graph-cli and graph-ts dependency versions.
• Fixes forcedClosures in the Indexer entity (previously it was badly counting which allocation closures where forced, since it only took into consideration scenarios where the address of the indexer was used to close it, but it didn't consider operators).
• Fixes version in the SubgraphVersion entity (previously it was initialized as 0 but never updated).
• Fixes some linter issues.