fix

MICTI.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: MICTI
-Version: 0.1.4
+Version: 0.1.5
 Summary: Feature extraction approach in single-cell gene expression profiling for cell-type marker identification.
 Home-page: https://github.com/insilicolife/micti
 Author: Nigatu Ayele

MICTI.egg-info/requires.txt

@@ -9,3 +9,4 @@ seaborn
 pyensembl
 bs4
 requests
+html5lib

MICTI/MARKERS.py

@@ -199,13 +199,13 @@ def get_Visualization(self,dim=2,method="PCA"):
 
 
     def get_cluster_data(self, cluster_number):
-        return self.data.toarray()[np.in1d(np.array(self.cluster_assignment), cluster_number),:], self.cellNames[np.in1d(np.array(self.cluster_assignment), cluster_number)]
+        return self.data.toarray()[np.in1d(self.cluster_assignment, cluster_number),:], self.cellNames[np.in1d(self.cluster_assignment, cluster_number)]
 
     def get_cluster_ICF_data(self, cluster_number):
-        return self.ICF(self.data[np.in1d(np.array(self.cluster_assignment), cluster_number),:])
+        return self.ICF(self.data[np.in1d(self.cluster_assignment, cluster_number),:])
 
     def get_cluster_CF_data(self,cluster_number):
-        return self.CF(self.data[np.in1d(np.array(self.cluster_assignment), cluster_number),:]) 
+        return self.CF(self.data[np.in1d(self.cluster_assignment, cluster_number),:]) 
 
     def get_selected_cluster_marker(self, clusters):
 

setup.py

@@ -5,7 +5,7 @@
 
 setuptools.setup(
     name="MICTI",
-    version="0.1.4",
+    version="0.1.5",
     author="Nigatu Ayele",
     author_email="[email protected]",
     description="Feature extraction approach in single-cell gene expression profiling for cell-type marker identification.",