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1. samtools/htslib samtools/htslib Public

   C library for high-throughput sequencing data formats

   C 815 443

2. pysam-developers/pysam pysam-developers/pysam Public

   Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

   Cython 792 274

3. samtools/hts-specs samtools/hts-specs Public

   Specifications of SAM/BAM and related high-throughput sequencing file formats

   TeX 662 173

4. cansam cansam Public

   C++ binding for SAM/BAM files

   C++ 7 1