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Add more datatype for dataset create, write and read #3

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merged 10 commits into from
Jun 12, 2019
Merged

Add more datatype for dataset create, write and read #3

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59bff1c
add float64 for dataset creation
weilewei Jun 11, 2019
0a5cd2e
fixing float32
weilewei Jun 11, 2019
e8f17e2
fixing float 64 and add tests
weilewei Jun 12, 2019
a546cda
add int8 data type
weilewei Jun 12, 2019
68acd35
add int16 datatype for dataset
weilewei Jun 12, 2019
084ab3e
add int32 type for dataset
weilewei Jun 12, 2019
8829163
add uint8 datatype fore dataset
weilewei Jun 12, 2019
d808ed0
add unit16 datatype
weilewei Jun 12, 2019
9b7b3aa
add unit32 datatype
weilewei Jun 12, 2019
7e1c08f
add uint64 datatype
weilewei Jun 12, 2019
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10 changes: 5 additions & 5 deletions main.c
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Original file line number Diff line number Diff line change
Expand Up @@ -34,17 +34,17 @@ int main() {
char* arrayName = "test_c.z5";
int cusezlib = 1;
int level = 1;
z5CreateFloatDataset(arrayName, ndim, shape, chunks, cusezlib, level);
z5WriteFloatSubarray(arrayName, data1, ndim, chunks, offset);
z5ReadFloatSubarray(arrayName, rdata, ndim, chunks, offset);
z5CreateFloat32Dataset(arrayName, ndim, shape, chunks, cusezlib, level);
z5WriteFloat32Subarray(arrayName, data1, ndim, chunks, offset);
z5ReadFloat32Subarray(arrayName, rdata, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(data1[i][j][k] == rdata[i][j][k]);
printf("data1 = %f\n",data1[i][0][0]);
}
z5WriteFloatSubarray("test_c.z5", data2, ndim, chunks, offset2);
z5ReadFloatSubarray("test_c.z5", rdata, ndim, chunks, offset2);
z5WriteFloat32Subarray("test_c.z5", data2, ndim, chunks, offset2);
z5ReadFloat32Subarray("test_c.z5", rdata, ndim, chunks, offset2);
printf("after read float\n");
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
Expand Down
153 changes: 140 additions & 13 deletions test_attributes.c
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Original file line number Diff line number Diff line change
Expand Up @@ -11,40 +11,58 @@ void my_create_dataset(char* arrayName)
float data1[10][10][10];
float data2[10][10][10];
float rdata[10][10][10];
double ddata[10][10][10];
double rddata[10][10][10];
long long int idata1[10][10][10];
long long int idata2[10][10][10];
long long int irdata[10][10][10];
int8_t i8data[10][10][10];
int8_t ri8data[10][10][10];
int16_t i16data[10][10][10];
int16_t ri16data[10][10][10];
int32_t i32data[10][10][10];
int32_t ri32data[10][10][10];
int64_t i64data[10][10][10];
int64_t ri64data[10][10][10];
uint8_t ui8data[10][10][10];
uint8_t rui8data[10][10][10];
uint16_t ui16data[10][10][10];
uint16_t rui16data[10][10][10];
uint32_t ui32data[10][10][10];
uint32_t rui32data[10][10][10];
uint64_t ui64data[10][10][10];
uint64_t rui64data[10][10][10];
unsigned int ndim = 3;
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++){
for (int k = 0; k<chunks[2]; k++){
data1[i][j][k]=rand()%1000+1;
idata1[i][j][k]=rand()%1000+1;
}
}
}
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++){
for (int k = 0; k<chunks[2]; k++){
data2[i][j][k]=rand()%1000+1;
idata2[i][j][k]=rand()%1000+1;
i8data[i][j][k]=rand()%1000+1;
i16data[i][j][k]=rand()%1000+1;
i32data[i][j][k]=rand()%1000+1;
i64data[i][j][k]=rand()%1000+1;
ui8data[i][j][k]=rand()%1000+1;
ui16data[i][j][k]=rand()%1000+1;
ui32data[i][j][k]=rand()%1000+1;
ui64data[i][j][k]=rand()%1000+1;
}
}
}
//char* arrayName = "test_c.z5";
int cusezlib = 1;
int level = 1;
z5CreateFloatDataset(arrayName, ndim, shape, chunks, cusezlib, level);
z5WriteFloatSubarray(arrayName, data1, ndim, chunks, offset);
z5ReadFloatSubarray(arrayName, rdata, ndim, chunks, offset);
z5CreateFloat32Dataset(arrayName, ndim, shape, chunks, cusezlib, level);
z5WriteFloat32Subarray(arrayName, data1, ndim, chunks, offset);
z5ReadFloat32Subarray(arrayName, rdata, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(data1[i][j][k] == rdata[i][j][k]);
printf("data1 = %f\n",data1[i][0][0]);
}
z5WriteFloatSubarray(arrayName, data2, ndim, chunks, offset2);
z5ReadFloatSubarray(arrayName, rdata, ndim, chunks, offset2);
z5WriteFloat32Subarray(arrayName, data2, ndim, chunks, offset2);
z5ReadFloat32Subarray(arrayName, rdata, ndim, chunks, offset2);
printf("after read float\n");
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
Expand Down Expand Up @@ -92,6 +110,115 @@ void my_create_dataset(char* arrayName)
z5readAttributesWithKeys(arrayName, keysinput, 2);

printf("after assert\n");

printf("testing different array types\n");


char* float64arrayName = "new_file/group1/float64variables";
z5CreateFloat64Dataset(float64arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat Float64Dataset===\n");
z5WriteFloat64Subarray(float64arrayName, ddata, ndim, chunks, offset);
printf("===successfully write Float64Dataset===\n");
z5ReadFloat64Subarray(float64arrayName, rddata, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(ddata[i][j][k] == rddata[i][j][k]);
}
printf("===successfully read Float64Dataset===\n");


char* int8arrayName = "new_file/group1/int8variables";
z5CreateInt8Dataset(int8arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat Int8Dataset===\n");
z5WriteInt8Subarray(int8arrayName, i8data, ndim, chunks, offset);
printf("===successfully write Int8Dataset===\n");
z5ReadInt8Subarray(int8arrayName, ri8data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(i8data[i][j][k] == ri8data[i][j][k]);
}
printf("===successfully read Int8Dataset===\n");

char* int16arrayName = "new_file/group1/int16variables";
z5CreateInt16Dataset(int16arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat Int16Dataset===\n");
z5WriteInt16Subarray(int16arrayName, i16data, ndim, chunks, offset);
printf("===successfully write Int16Dataset===\n");
z5ReadInt16Subarray(int16arrayName, ri16data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(i16data[i][j][k] == ri16data[i][j][k]);
}
printf("===successfully read Int16Dataset===\n");

char* int32arrayName = "new_file/group1/int32variables";
z5CreateInt32Dataset(int32arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat Int32Dataset===\n");
z5WriteInt32Subarray(int32arrayName, i32data, ndim, chunks, offset);
printf("===successfully write Int32Dataset===\n");
z5ReadInt32Subarray(int32arrayName, ri32data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(i32data[i][j][k] == ri32data[i][j][k]);
}
printf("===successfully read Int32Dataset===\n");

char* uint8arrayName = "new_file/group1/uint8variables";
z5CreateUInt8Dataset(uint8arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat UInt8Dataset===\n");
z5WriteUInt8Subarray(uint8arrayName, ui8data, ndim, chunks, offset);
printf("===successfully write UInt8Dataset===\n");
z5ReadUInt8Subarray(uint8arrayName, rui8data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(ui8data[i][j][k] == rui8data[i][j][k]);
}
printf("===successfully read UInt8Dataset===\n");

char* uint16arrayName = "new_file/group1/uint16variables";
z5CreateUInt16Dataset(uint16arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat UInt16Dataset===\n");
z5WriteUInt16Subarray(uint16arrayName, ui16data, ndim, chunks, offset);
printf("===successfully write UInt16Dataset===\n");
z5ReadUInt16Subarray(uint16arrayName, rui16data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(ui16data[i][j][k] == rui16data[i][j][k]);
}
printf("===successfully read UInt16Dataset===\n");

char* uint32arrayName = "new_file/group1/uint32variables";
z5CreateUInt32Dataset(uint32arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat UInt32Dataset===\n");
z5WriteUInt32Subarray(uint32arrayName, ui32data, ndim, chunks, offset);
printf("===successfully write UInt32Dataset===\n");
z5ReadUInt32Subarray(uint32arrayName, rui32data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(ui32data[i][j][k] == rui32data[i][j][k]);
}
printf("===successfully read UInt32Dataset===\n");

char* uint64arrayName = "new_file/group1/uint64variables";
z5CreateUInt64Dataset(uint64arrayName, ndim, shape, chunks, cusezlib, level);
printf("===successfully creat UInt64Dataset===\n");
z5WriteUInt64Subarray(uint64arrayName, ui64data, ndim, chunks, offset);
printf("===successfully write UInt64Dataset===\n");
z5ReadUInt64Subarray(uint64arrayName, rui64data, ndim, chunks, offset);
for (int i = 0; i < chunks[0]; i++){
for (int j = 0; j < chunks[1]; j++)
for (int k = 0; k<chunks[2]; k++)
assert(ui64data[i][j][k] == rui64data[i][j][k]);
}
printf("===successfully read UInt64Dataset===\n");

}

void test_create_file()
Expand Down
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