ci(docs): mkdocs gh-deploy

.github/workflows/build-and-publish-docs.yml

@@ -0,0 +1,57 @@
+name: Build and Deploy Documentation
+
+on:
+  push:
+    branches:
+      - main
+      - qy/create-docs
+
+permissions:
+  contents: write
+
+jobs:
+  build-and-deploy:
+    runs-on: ubuntu-latest
+
+    steps:
+      # Checkout the repository
+      - name: Checkout Code
+        uses: actions/checkout@v4
+
+      # Configure Git credentials
+      - name: Configure Git Credentials
+        run: |
+          git config user.name "github-actions[bot]"
+          git config user.email "41898282+github-actions[bot]@users.noreply.github.com"
+
+      # Set up Python
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.x"
+
+      # Generate cache ID
+      - name: Set Cache ID
+        run: echo "cache_id=$(date --utc '+%V')" >> $GITHUB_ENV
+
+      # Cache Python dependencies
+      - name: Cache Python Dependencies
+        uses: actions/cache@v4
+        with:
+          key: mkdocs-material-${{ env.cache_id }}
+          path: .cache
+          restore-keys: |
+            mkdocs-material-
+
+      # Install MkDocs and Plugins, Deploy Documentation
+      - name: Install Dependencies and Deploy Docs
+        run: |
+          pip install mkdocs-material \
+                      mkdocs-git-revision-date-localized-plugin \
+                      mkdocs-git-committers-plugin-2 \
+                      mkdocs-autorefs \
+                      mkdocstrings[python] \
+                      markdown-exec
+          mkdocs gh-deploy --force
+        env:
+          MKDOCS_GIT_COMMITTERS_APIKEY: ${{ secrets.MKDOCS_GIT_COMMITTERS_APIKEY }}

mkdocs.yml

@@ -1,6 +1,6 @@
 site_name: GoNuclear
 site_url: https://kreshuklab.github.io/go-nuclear/
-site_description: Nuclear Segmentation Guide and Pipelines
+site_description: Nuclear Segmentation Guides and Pipelines
 repo_name: kreshuklab/go-nuclear
 repo_url: https://github.com/kreshuklab/go-nuclear
 edit_uri: edit/main/docs/
@@ -86,7 +86,7 @@ plugins:
       enable_creation_date: true
   - git-committers:
       repository: kreshuklab/go-nuclear
-      branch: master
+      branch: main
 
 nav:
   - Overview:
@@ -99,4 +99,7 @@ nav:
       - chapters/stardist/index.md
 
   - Cellpose:
-      - chapters/cellpose/index.md
+      - chapters/cellpose/index.md
+
+  - Evaluation:
+      - chapters/evaluation/index.md