Merge pull request #1482 from nf-core/fix_trimgalore_linting

Update trimgalore module for save_unpaired fix
nf-core · Jan 8, 2025 · 0a86dc4 · 0a86dc4
2 parents 766b0a3 + 3450202
commit 0a86dc4
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -10,6 +10,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ### Enhancements & fixes
 
 - [PR #1480](https://github.com/nf-core/rnaseq/pull/1480) - Bump version after release 3.18.0
+- [PR #1482](https://github.com/nf-core/rnaseq/pull/1482) - Update trimgalore module for save_unpaired fix
 
 # 3.18.0 - 2024-12-19
 

diff --git a/modules.json b/modules.json
@@ -254,7 +254,7 @@
                     },
                     "trimgalore": {
                         "branch": "master",
-                        "git_sha": "8c5eeedd45e295fc9a4f164631da6a8b37e6b9c6",
+                        "git_sha": "8d3e71002c5008e3f68a691ad8cd32c346356258",
                         "installed_by": ["fastq_fastqc_umitools_trimgalore"]
                     },
                     "tximeta/tximport": {
@@ -358,7 +358,7 @@
                     },
                     "fastq_fastqc_umitools_trimgalore": {
                         "branch": "master",
-                        "git_sha": "8c5eeedd45e295fc9a4f164631da6a8b37e6b9c6",
+                        "git_sha": "4c2d06a5e79abf08ba7f04c58e39c7dad75f094d",
                         "installed_by": ["fastq_qc_trim_filter_setstrandedness", "subworkflows"]
                     },
                     "fastq_qc_trim_filter_setstrandedness": {

diff --git a/modules/nf-core/trimgalore/environment.yml b/modules/nf-core/trimgalore/environment.yml
diff --git a/modules/nf-core/trimgalore/main.nf b/modules/nf-core/trimgalore/main.nf
diff --git a/modules/nf-core/trimgalore/meta.yml b/modules/nf-core/trimgalore/meta.yml
diff --git a/modules/nf-core/trimgalore/tests/main.nf.test b/modules/nf-core/trimgalore/tests/main.nf.test