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testing rdf w bond list
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jrudz committed Jan 30, 2025
1 parent 6969179 commit faa9521
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3 changes: 3 additions & 0 deletions simulationworkflowschema/molecular_dynamics.py
Original file line number Diff line number Diff line change
Expand Up @@ -467,6 +467,9 @@ def archive_to_universe(
sec_run, method_index=-1, model_index=-1
)

# print('bond list:')
# print(bonds)

# get the system times
system_timestep = 1.0 * ureg.picosecond

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