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Update the docs and add kgcl diff to release pipeline
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matentzn committed Jun 25, 2024
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2 changes: 1 addition & 1 deletion docs/developers/release.md
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Expand Up @@ -40,7 +40,7 @@ EDIT: As of today (Wed 5 Oct, 2022), this does not work without passing a GitHub
- tmp/hpoa/phenotype_annotation_negated.tab
- tmp/hpoa/phenotype_annotation.tab
- tmp/hpoa/phenotype_to_genes.txt
7. ALT2: If you have `gh` installed, you can use the following pipeline: `make public_release GHVERSION=v2022-10-05` (no `sh run.sh`!). This will automate the above step (6). When the draft release is successfully created, you should see a link in your console, like `https://github.com/obophenotype/human-phenotype-ontology/releases/tag/untagged-a230b72fb7457a460e79` (final line of output). Go to this link with your browser. Edit the draft release in whatever way you wish.
7. ALT2: If you have `gh` installed, you can use the following pipeline: `make public_release GHVERSION=v2022-10-05` (no `sh run.sh`!). This will automate the above step (6). When the draft release is successfully created, you should see a link in your console, like `https://github.com/obophenotype/human-phenotype-ontology/releases/tag/untagged-a230b72fb7457a460e79` (final line of output). Go to this link with your browser. Edit the draft release in whatever way you wish. Usually you want to copy the contents from reports/difference_release_base.md into the description.
8. Click on `Publish release`.
9. Add to the release notes in github
10. announce on hpo-mailing list (groups.io) - this is the most important part, where we have to take a bit of time to formulate the mail and align with Peter, Nicole, etc. (all the people that actively worked on hpo for this release)
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2 changes: 2 additions & 0 deletions src/ontology/hp.Makefile
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Expand Up @@ -362,6 +362,8 @@ KGCL_ONTOLOGY=hp-base.obo
upgrade_oak:
pip install -U oaklib

prepare_release: kgcl-diff

.PHONY: kgcl-diff
kgcl-diff: kgcl-diff-release-base

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