Releases: openforcefield/yammbs
Releases · openforcefield/yammbs
0.2.0
What's Changed
- Add logging at high-level landmarks or common debug points by @mattwthompson in #86
- Add more useful metrics by @mattwthompson in #85
- Process torsion profiles by @mattwthompson in #76
- Switch version handling to use
versioningit
by @mattwthompson in #87
Full Changelog: 0.1.1...0.2.0
0.1.1
What's Changed
- Drop Intel macOS image by @mattwthompson in #75
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #74
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #77
- Add cron job to CI, update dependencies by @mattwthompson in #79
- Lazy-load Pandas by @mattwthompson in #80
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #78
- Bump codecov/codecov-action from 4 to 5 by @dependabot in #82
- Speed up loading a
MoleculeStore
from aQCArchiveDataset
by @ntBre in #81 - Delete
CachedResultCollection
by @ntBre in #83 - [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #84
New Contributors
- @dependabot made their first contribution in #82
Full Changelog: 0.1.0...0.1.1
0.1.0
What's Changed
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #52
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #53
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #54
- Update tooling by @mattwthompson in #58
- Add YAMMBS-specific models by @mattwthompson in #51
- Add initial draft of output models by @mattwthompson in #59
- Update some automation/tooling by @mattwthompson in #64
- Increase test coverage by @mattwthompson in #63
- Run type-checking by @mattwthompson in #60
- Add back plotting function back by @mattwthompson in #66
- Use Pydantic v2 API by @mattwthompson in #57
- Get Molecules from the database by @ntBre in #70
- Fixes #67 by @ntBre in #69
- Skip molecules with unassigned valence terms by @ntBre in #65
- Update getting started guide, example script by @mattwthompson in #68
- Merge models refactor trunk by @mattwthompson in #61
- Fix undefined stereo crash by @ntBre in #73
Full Changelog: 0.0.8...0.1.0
0.0.8
What's Changed
- Changed cached_result to be compatible with new QCPortal by @amcisaac in #40
- Update linters and tests for upstream changes by @mattwthompson in #47
- Make molecules from SMILES where possible by @mattwthompson in #46
- Filter results by moeity with Checkmol or SMIRKS/SMARTS by @mattwthompson in #44
- Always load cosmetic attributes by @mattwthompson in #49
Full Changelog: 0.0.7...0.0.8
0.0.7
What's Changed
- Fix
inchi_key
scoping, add back to minimization models by @mattwthompson in #35
Full Changelog: 0.0.6...0.0.7
0.0.6
What's Changed
- Rename project to YAMMBS by @mattwthompson in #32
- Add dependabot, update CI matrix by @mattwthompson in #33
- Clear conformers before adding ones for analysis by @mattwthompson in #29
- Use defaults of
LocalEnergyMinimizer.minimize
by @mattwthompson in #31
Full Changelog: 0.0.5...0.0.6
0.0.5
What's Changed
- Use index of QM minimum energy as MM reference point by @mattwthompson in #25
- Cache OptimizationResultCollection.to_records calls by @ntBre in #24
- Use only Pydantic v2 in installation by @mattwthompson in #26
- Improve performance by @ntBre in #21
- Remove some unused functions, attributes, logic by @mattwthompson in #27
Full Changelog: 0.0.4...0.0.5
0.0.4
0.0.3
What's Changed
- Add
ICRMSD.to_csv
by @mattwthompson in #18 - Fix possible typo in ordering by @mattwthompson in #17
Full Changelog: 0.0.2...0.0.3
0.0.2
What's Changed
- Add internal coordinate RMSD method by @mattwthompson in #15
Full Changelog: 0.0.1...0.0.2