Repositories list

• lora-sc2-spillover

  Public
  spillover

  HTML

  •0•0•2•0•Updated Dec 12, 2024Dec 12, 2024

• lora-zoonoses-report

  Public
  Zoonoses report analysis and preparation

  HTML

  •0•0•1•0•Updated Dec 12, 2024Dec 12, 2024

• AMView

  Public
  Shiny application to visualize antimicrobial use data

  R

  •1•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• lora-doc

  Public
  Disease Ocurrence Cases

  0•0•0•0•Updated Dec 4, 2024Dec 4, 2024

• fallen-wildlife

  Public
  Viltvårdsfonden - Who sends fallen wildlife to SVA and why?

  0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

• PigPeaks

  Public
  data-driven surveillance based on on-farm records from swine production farms.

  HTML

  •

  GNU General Public License v3.0

  •3•3•0•0•Updated Mar 26, 2024Mar 26, 2024

• MATRIX-dashboards

  Public
  An inventory of dashboard development for One Health disease surveillance

  HTML

  •3•3•0•0•Updated Jan 10, 2024Jan 10, 2024

• decide_flex_exmaple

  Public
  R

  •0•0•0•0•Updated May 4, 2023May 4, 2023

• data-viz-quiz

  Public
  1•0•0•0•Updated May 2, 2023May 2, 2023

• EFSA-disease-profiles

  Public
  HTML

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Apr 18, 2023Apr 18, 2023

• freedom

  Public
  An R package to calculate probability of freedom from disease in a population based on surveillance data

  R

  •3•1•0•0•Updated Jan 24, 2023Jan 24, 2023

• game.FMD

  Public
  R

  •0•0•0•0•Updated Nov 14, 2022Nov 14, 2022

• FMD_model

  Public
  A model of FMD spread among a set of fake cattle herds

  R

  •0•0•0•0•Updated Oct 7, 2022Oct 7, 2022

• BIOPIGEE

  Public
  Code for a HEV transmission model in pig farms

  C++

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 5, 2022Oct 5, 2022

• AHSURED

  Public
  Animal Health SUrveillance REporting guiDelines

  1•0•0•0•Updated Jan 24, 2022Jan 24, 2022

• HSO

  Public
  Health Surveillance Ontology

  obofoundry

  3•3•0•0•Updated Dec 13, 2021Dec 13, 2021

• OBOFoundry.github.io

  Public
  Metadata and website for the Open Bio Ontologies Foundry Ontology Registry

  HTML

  •

  Other

  •207•0•0•0•Updated Dec 10, 2020Dec 10, 2020

• purl.obolibrary.org

  Public
  A system for managing OBO PURLs

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •128•0•0•0•Updated Nov 28, 2020Nov 28, 2020

• mill

  Public
  R

  •0•0•2•1•Updated Jun 16, 2020Jun 16, 2020

• SVA3D

  Public
  Data to Decision Dashboards

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jan 7, 2020Jan 7, 2020

• NOVA

  Public
  Code from EJP NOVA project

  R

  •0•0•0•0•Updated Dec 13, 2019Dec 13, 2019

• VLT-data-analysis

  Public
  Analysis of historical wildlife disease surveillance data

  R

  •0•0•0•0•Updated Oct 25, 2019Oct 25, 2019

• AHO

  Public
  Animal Health Ontology

  2•0•0•0•Updated Feb 14, 2019Feb 14, 2019

• AHSO

  Public
  Animal Health Surveillance Ontological Framework

  4•3•0•0•Updated Feb 14, 2019Feb 14, 2019

• SVASSS

  Public
  SVA's syndromic surveillance system

  R

  •2•3•1•0•Updated Jan 23, 2019Jan 23, 2019

• learnr

  Public
  Makefile

  •0•0•0•0•Updated Sep 10, 2018Sep 10, 2018

• svamp

  Public
  An R package that generates a geographic summary report for farm data in Sweden

  R

  •0•0•3•0•Updated Mar 12, 2018Mar 12, 2018

• kilde

  Public
  R Package for Bayesian source attribution

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •1•1•1•0•Updated Aug 23, 2017Aug 23, 2017

• svdc

  Public
  A package to clean data that goes into the svamp report

  R

  •0•0•2•0•Updated Oct 17, 2016Oct 17, 2016