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rhoadesScholar/README.md

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“To leave the world a bit better, whether by a healthy child, a garden patch or a redeemed social condition, to know even one life has breathed easier because you have lived; this is to have succeeded.”

Ralph Waldo Emerson

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  1. janelia-cellmap/cellmap-segmentation-challenge janelia-cellmap/cellmap-segmentation-challenge Public

    Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post…

    Python 17 1

  2. janelia-cellmap/cellmap-models janelia-cellmap/cellmap-models Public

    Repository of model architectures and network weights used for CellMap segmentations.

    Python 10

  3. janelia-cellmap/cellmap-data janelia-cellmap/cellmap-data Public

    Utility for loading CellMap data for machine learning training, utilizing PyTorch, TensorStore, Xarray, and PyDantic.

    Python 2 1

  4. janelia-cellmap/dacapo janelia-cellmap/dacapo Public

    A framework for easy application of established machine learning techniques on large, multi-dimensional images.

    Python 49 9

  5. funkelab/gunpowder funkelab/gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    Python 81 56

  6. funkelab/daisy funkelab/daisy Public

    Block-wise task scheduling for large nD volumes.

    Python 28 17