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Alternative CI #60

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1 change: 1 addition & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -14,3 +14,4 @@
^cran-comments\.md$
^CRAN-RELEASE$
^\.httr-oauth$
^codecov\.yml$
1 change: 1 addition & 0 deletions .github/.gitignore
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*.html
95 changes: 95 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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on:
push:
branches:
- master
pull_request:
branches:
- master

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'devel'}
- {os: macOS-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-16.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.5', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}

env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master
with:
r-version: ${{ matrix.config.r }}

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"

- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}

- name: Session info
run: |
options(width = 100)
pkgs <- installed.packages()[, "Package"]
sessioninfo::session_info(pkgs, include_base = TRUE)
shell: Rscript {0}

- name: Check
env:
_R_CHECK_CRAN_INCOMING_: false
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}

- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check
10 changes: 10 additions & 0 deletions .github/workflows/check_lintr.yaml
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on: [push]

name: check-linters

jobs:
check_linters:
runs-on: ubuntu-latest
name: Check for linters in the code
steps:
- uses: inbo/actions/lint_pkg@master
45 changes: 45 additions & 0 deletions .github/workflows/pkgdown.yaml
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on:
push:
branches: master

name: pkgdown

jobs:
pkgdown:
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}

- name: Cache R packages
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install dependencies
run: |
install.packages("remotes")
remotes::install_deps(dependencies = TRUE)
remotes::install_dev("pkgdown")
shell: Rscript {0}

- name: Install package
run: R CMD INSTALL .

- name: Deploy package
run: pkgdown::deploy_to_branch(new_process = FALSE)
shell: Rscript {0}
51 changes: 51 additions & 0 deletions .github/workflows/pr-commands.yaml
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on:
issue_comment:
types: [created]
name: Commands
jobs:
document:
if: startsWith(github.event.comment.body, '/document')
name: document
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master
- name: Install dependencies
run: Rscript -e 'install.packages(c("remotes", "roxygen2"))' -e 'remotes::install_deps(dependencies = TRUE)'
- name: Document
run: Rscript -e 'roxygen2::roxygenise()'
- name: commit
run: |
git add man/\* NAMESPACE
git commit -m 'Document'
- uses: r-lib/actions/pr-push@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
style:
if: startsWith(github.event.comment.body, '/style')
name: style
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master
- name: Install dependencies
run: Rscript -e 'install.packages("styler")'
- name: Style
run: Rscript -e 'styler::style_pkg()'
- name: commit
run: |
git add \*.R
git commit -m 'Style'
- uses: r-lib/actions/pr-push@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
46 changes: 46 additions & 0 deletions .github/workflows/test-coverage.yaml
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on:
push:
branches:
- master
pull_request:
branches:
- master

name: test-coverage

jobs:
test-coverage:
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}

- name: Cache R packages
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install dependencies
run: |
install.packages(c("remotes"))
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("covr")
shell: Rscript {0}

- name: Test coverage
run: covr::codecov()
shell: Rscript {0}
71 changes: 0 additions & 71 deletions .travis.yml

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