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Pull requests: satijalab/seurat

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Pull requests list

Fix SpatialDimplot(..., interactive = TRUE) to support all SpatialImage types
#9691 opened Feb 18, 2025 by dcollins15 • Draft
Fix PercentageFeatureSet to respect the assay parameter
#9686 opened Feb 14, 2025 by dcollins15 • Draft
chore: update preprocessing.R
#9674 opened Feb 9, 2025 by eltociear Loading…
Raster.dpi vlnplot
#9665 opened Feb 4, 2025 by samuel-marsh Loading…
1
feature: updates for cellranger 9.0
#9541 opened Dec 10, 2024 by stephenwilliams22 Loading…
30
Fix DimPlot convenience function logic (#9436)
#9493 opened Nov 18, 2024 by rharao Loading…
Add uwot.approx_pow option to RunUMAP for better reproducibility
#9449 opened Nov 1, 2024 by daskelly Loading…
Fix ggplot2 deprecation warning in DotPlot()
#9409 opened Oct 18, 2024 by Billsfriend Loading…
Added the functionality of scale.factor in NormalizeData being set to "median" of counts
#9389 opened Oct 11, 2024 by pranavm2109 Loading…
Add Option to Plot Percentage of Variance Explained in ElbowPlot Func…
#8929 opened May 24, 2024 by moi-taiga Loading…
1
Sketch Data Improvement
#8913 opened May 18, 2024 by Sandman-1 Loading…
Fixed min.cells.group issue in FindConservedMarkers()
#8910 opened May 17, 2024 by hamelyz Loading…
Fix PercentageFeatureSet
#8659 opened Mar 20, 2024 by maxim-h Loading…
3
Fix corner case issue in BlendExpression
#8486 opened Feb 16, 2024 by egeulgen Loading…
Update umi.assay in GetResidual
#8203 opened Dec 19, 2023 by aladyeva-research Loading…
3
Fix: UpdateSymbolList incorrectly renames genes
#8179 opened Dec 12, 2023 by samuel-marsh Loading…
5
Adding rworkflows
#7751 opened Sep 1, 2023 by bschilder Loading…
proportional sketching
#7444 opened Jun 13, 2023 by inofechm Loading…
1
Support to handle .parquet output from Vizgen
#7190 opened Apr 19, 2023 by alikhuseynov Loading…
43
Support for integrating large datasets
#6567 opened Oct 17, 2022 by zhanghao-njmu Loading…
Add ReadDragen to support Illumina Dragen output
#6070 opened Jun 13, 2022 by parvsachdeva Loading…
1
Update integration_introduction.Rmd
#5398 opened Dec 16, 2021 by simonmfr Loading…
3
enable PCA on data to exploit sparseness
#2333 opened Nov 18, 2019 by jan-glx Loading…
Deprecate weight.by.var
#2331 opened Nov 17, 2019 by jan-glx Loading…
Fix weight.by.var for approx=FALSE
#2330 opened Nov 17, 2019 by jan-glx Loading…
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