fix: docker workflow

socialgene · Jul 24, 2024 · dfff24f · dfff24f
1 parent 438d669
commit dfff24f
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Showing 3 changed files with 22 additions and 52 deletions.
diff --git a/.github/workflows/docker.yml b/.github/workflows/docker.yml
@@ -59,25 +59,25 @@ jobs:
         - name: Push Docker images
           run: |
               docker push chasemc2/sgnf-antismash:$RELEASE_NUMBER
-  build_and_push_prokka:
-      name: Build and push prokka
-      runs-on: ubuntu-latest
-      continue-on-error: true
-      steps:
-        - name: Check out the repo
-          uses: actions/checkout@v4
-        - name: Log in to Docker Hub
-          uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a
-          with:
-            username: ${{ secrets.DOCKER_USERNAME }}
-            password: ${{ secrets.DOCKERHUBPAT }}
-        - name: Get release number without preceding v
-          id: get_release_number
-          run: echo "RELEASE_NUMBER=${GITHUB_REF#refs/tags/v}" >> $GITHUB_ENV
-        - name: Build Docker images
-          run: |
-              cd dockerfiles/prokka
-              docker build -t chasemc2/sgnf-prokka:$RELEASE_NUMBER .
-        - name: Push Docker images
-          run: |
-              docker push chasemc2/sgnf-prokka:$RELEASE_NUMBER
+  # build_and_push_prokka:
+  #     name: Build and push prokka
+  #     runs-on: ubuntu-latest
+  #     continue-on-error: true
+  #     steps:
+  #       - name: Check out the repo
+  #         uses: actions/checkout@v4
+  #       - name: Log in to Docker Hub
+  #         uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a
+  #         with:
+  #           username: ${{ secrets.DOCKER_USERNAME }}
+  #           password: ${{ secrets.DOCKERHUBPAT }}
+  #       - name: Get release number without preceding v
+  #         id: get_release_number
+  #         run: echo "RELEASE_NUMBER=${GITHUB_REF#refs/tags/v}" >> $GITHUB_ENV
+  #       - name: Build Docker images
+  #         run: |
+  #             cd dockerfiles/prokka
+  #             docker build -t chasemc2/sgnf-prokka:$RELEASE_NUMBER .
+  #       - name: Push Docker images
+  #         run: |
+  #             docker push chasemc2/sgnf-prokka:$RELEASE_NUMBER
diff --git a/dockerfiles/prokka/Dockerfile b/dockerfiles/prokka/Dockerfile
diff --git a/dockerfiles/prokka/environment.yaml b/dockerfiles/prokka/environment.yaml