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A repository for various tests and minimal-reproducible-example workflows

Nextflow 1 3 Updated Jan 20, 2025

A tool for making fat OSX binaries (a portable lipo)

Go 114 10 Updated Mar 15, 2021

Decided to move the gist into a repo of it's own so I can better link to the files

78 30 Updated Dec 11, 2020

Log into multiple mega.nz accounts to keep files from being deleted

C# 160 29 Updated Jan 20, 2021
Jinja 1 Updated Aug 29, 2022

Color standards for terminal emulators

1,263 49 Updated Sep 15, 2024
Groovy 2 Updated Jan 6, 2024

An unofficial template to build Nextflow Plugins

Groovy 2 2 Updated Mar 21, 2024

C++ API & command-line toolkit for working with BAM data

C++ 423 154 Updated Jul 12, 2024

A tool set for short variant discovery in genetic sequence data.

C 194 3 Updated May 4, 2021
Go 25 Updated Jun 2, 2024

Nextflow plugin implementation skeleton

Groovy 10 25 Updated Jan 30, 2025

K-mer counting in golang

Go 5 Updated Mar 10, 2020

CWL (and input file) parser for Golang

Go 2 Updated Jul 27, 2018

High performance Workflow Runner

Go 30 12 Updated Feb 13, 2025

WR extension module for Nextflow

Groovy 1 Updated Feb 28, 2022
Groovy 28 12 Updated Feb 6, 2025

Language and framework for high performance computational pipelines.

Go 148 20 Updated Jul 29, 2024
Python 1 1 Updated Jun 29, 2023

Welcome to the AWS Code Examples Repository. This repo contains code examples used in the AWS documentation, AWS SDK Developer Guides, and more. For more information, see the Readme.md file below.

Java 9,822 5,704 Updated Feb 12, 2025

AWS Batch 101

Shell 18 26 Updated Apr 4, 2018

AWS SDK for the Go programming language (In Maintenance Mode, End-of-Life on 07/31/2025). The AWS SDK for Go v2 is available here: https://github.com/aws/aws-sdk-go-v2

Go 8,669 2,071 Updated Jan 21, 2025

Open-source software for volunteer computing and grid computing.

PHP 2,082 464 Updated Feb 13, 2025

Customer workshop materials

Nextflow 17 8 Updated May 11, 2023

Information on how to set up RStudio Workbench with SLURM Launcher and Singularity

Dockerfile 18 2 Updated Dec 5, 2024

Bioinformatics Test Data Generator

Python 1 Updated Jun 24, 2022

Chat with Meta's LLaMA models at home made easy

Python 834 118 Updated Apr 2, 2023

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

Go 1,036 87 Updated Feb 13, 2025

Prime Number Projects in C#/C++/Python

C 112 17 Updated Jun 18, 2023

WDL plugin for pytest

Python 48 8 Updated Aug 1, 2023
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