Fix Astropy and scikit-learn test

harness/constants.py

@@ -215,7 +215,7 @@
     ].append("sed -i 's/Jinja2>=2.3/Jinja2<3.1/' setup.py")
 
 MAP_VERSION_TO_INSTALL_ASTROPY = {
-    k: {"python": "3.9", "install": "pip install -e .[test]"}
+    k: {"python": "3.9", "install": "python setup.py install"}
     for k in
         ["0.1", "0.2", "0.3", "0.4", "1.1", "1.2", "1.3", "3.0", "3.1", "3.2"] + \
         ["4.1", "4.2", "4.3", "5.0", "5.1", "5.2"]

harness/context_manager.py

@@ -321,12 +321,21 @@ def __enter__(self):
                     os.remove(path_to_reqs)
                 else:
                     # Create environment + install dependencies
-                    cmd = f"{exec_cmd} create -n {env_name} python={install['python']} {pkgs} -y"
+                    cmd = f"{exec_cmd} create -n {env_name} python={install['python']} -y"
                     logger_testbed.info(
                         f"[Testbed] Creating environment {env_name}; Command: {cmd}"
                     )
                     self.exec(cmd.split(" "))
 
+                    # Activate the environment and install the packages
+                    activate_cmd = f". {path_activate} {env_name}"
+                    install_cmd = f"pip install {pkgs}"
+                    full_cmd = f"{activate_cmd} && echo 'activate successful' && {install_cmd}"
+                    logger_testbed.info(
+                        f"[Testbed] Installing environment dependencies {pkgs}; Command: {full_cmd}"
+                    )
+                    self.exec(full_cmd, shell=True)
+
                 # Install additional packages if specified
                 if "pip_packages" in install:
                     cmd = f"source {path_activate} {env_name} && pip install {install['pip_packages']}"