Lipinski Flag

Added a change for the use of Lipinski compliance (or not). -lip
wcatykid · Nov 25, 2015 · 23702fc · 23702fc
1 parent 21308eb
commit 23702fc
Show file tree

Hide file tree

Showing 94 changed files with 1,475 additions and 261 deletions.
diff --git a/Atom.cpp b/Atom.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #include <iostream>

diff --git a/Atom.h b/Atom.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _ATOM_GUARD

diff --git a/AtomT.cpp b/AtomT.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #include <string>

diff --git a/AtomT.h b/AtomT.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _ATOM_TYPE_GUARD

diff --git a/Bond.cpp b/Bond.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #include <iostream>

diff --git a/Bond.h b/Bond.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _BOND_GUARD

diff --git a/ConnectableAtom.cpp b/ConnectableAtom.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #include "ConnectableAtom.h"

diff --git a/ConnectableAtom.h b/ConnectableAtom.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _CONNECTABLE_ATOM_GUARD

diff --git a/Constants.cpp b/Constants.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #include "Constants.h"

diff --git a/Constants.h b/Constants.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _CONSTANTS_GUARD

diff --git a/EdgeAggregator.h b/EdgeAggregator.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _EDGE_AGGREGATOR_GUARD

diff --git a/EdgeAnnotation.h b/EdgeAnnotation.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _EDGE_ANNOTATION_GUARD

diff --git a/EdgeDatabase.h b/EdgeDatabase.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _EDGE_DATABASE_GUARD

diff --git a/FixedSortedList.h b/FixedSortedList.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _FIXED_SORTED_LIST_GUARD

diff --git a/FragmentEdgeMap.cpp b/FragmentEdgeMap.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #include "FragmentEdgeMap.h"

diff --git a/FragmentEdgeMap.h b/FragmentEdgeMap.h
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */
 
 #ifndef _FRAGMENT_EDGE_MAP_GUARD

diff --git a/IdFactory.cpp b/IdFactory.cpp
@@ -1,18 +1,18 @@
 /*
- *  This file is part of synth.
+ *  This file is part of esynth.
  *
- *  synth is free software: you can redistribute it and/or modify
+ *  esynth is free software: you can redistribute it and/or modify
  *  it under the terms of the GNU General Public License as published by
  *  the Free Software Foundation, either version 3 of the License, or
  *  (at your option) any later version.
  *
- *  synth is distributed in the hope that it will be useful,
+ *  esynth is distributed in the hope that it will be useful,
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  *  GNU General Public License for more details.
  *
  *  You should have received a copy of the GNU General Public License
- *  along with synth.  If not, see <http://www.gnu.org/licenses/>.
+ *  along with esynth.  If not, see <http://www.gnu.org/licenses/>.
  */