Skip to content

Actions: OpenOmics/metavirs

Actions

tests

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
main.yaml
21 workflow runs
21 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Chore: Increasing minor version for new project-level aggregation steps. tests #105: Commit 80f6ecb pushed by skchronicles
February 13, 2025 16:56 55s main
main
February 13, 2025 16:56 55s
Creating project-level excel spreadsheet with counts, coverage, taxon… tests #104: Commit 9f2b014 pushed by skchronicles
February 5, 2025 18:58 42s main
main
February 5, 2025 18:58 42s
Use blast docker image with pandas installation tests #103: Commit 9d2bc5c pushed by skchronicles
February 5, 2025 15:51 44s main
main
February 5, 2025 15:51 44s
Adding project-level matrices for counts, cov, contigs at different t… tests #102: Commit dd22d9b pushed by skchronicles
February 4, 2025 22:36 42s main
main
February 4, 2025 22:36 42s
Adding number of contigs belonging to a given taxa tests #101: Commit f4a9210 pushed by skchronicles
February 4, 2025 20:55 47s main
main
February 4, 2025 20:55 47s
Adding script to create cov, counts, contigID matrix tests #100: Commit 513255b pushed by skchronicles
February 4, 2025 20:39 44s main
main
February 4, 2025 20:39 44s
Chore: updating snakemake version requirement tests #99: Commit 569823e pushed by skchronicles
January 28, 2025 16:19 41s main
main
January 28, 2025 16:19 41s
Chore: adding new contig length filter option to docs tests #98: Commit 77a6c55 pushed by skchronicles
January 28, 2025 15:38 48s main
main
January 28, 2025 15:38 48s
Remove dup header from output file tests #97: Commit 0426a7e pushed by skchronicles
January 28, 2025 14:45 43s main
main
January 28, 2025 14:45 43s
Adding steps to aggregate counts at family, genus, species level tests #96: Commit 89cd08c pushed by skchronicles
January 27, 2025 21:55 46s main
main
January 27, 2025 21:55 46s
Adding exe bit on script tests #95: Commit 608f190 pushed by skchronicles
January 27, 2025 19:56 49s main
main
January 27, 2025 19:56 49s
Chore: Bumping up minor version for new feature, contig length filter… tests #94: Commit aabf808 pushed by skchronicles
January 22, 2025 19:55 43s main
main
January 22, 2025 19:55 43s
Patch: Catch bowtie2-build error due to empty FASTA file. tests #93: Commit aba7762 pushed by skchronicles
January 21, 2025 22:29 41s main
main
January 21, 2025 22:29 41s
Patch: Updating PATH to CAT which changed since last download. tests #92: Commit 4098ef6 pushed by skchronicles
January 21, 2025 18:51 42s main
main
January 21, 2025 18:51 42s
Feat: Updating rules to generate project report with filtered kraken … tests #91: Commit 6b45ca7 pushed by skchronicles
January 17, 2025 21:52 45s main
main
January 17, 2025 21:52 45s
Renaming main smk and updating viral table path tests #90: Commit 4fdaa75 pushed by skchronicles
January 15, 2025 16:39 57s main
main
January 15, 2025 16:39 57s
Feat: Adding contig filter length, contig count step, and taxonomic v… tests #89: Commit 35b3428 pushed by skchronicles
January 14, 2025 23:07 53s main
main
January 14, 2025 23:07 53s
Removing unused dependecies and adding taxonkit tests #88: Commit 19518eb pushed by skchronicles
January 13, 2025 21:38 47s main
main
January 13, 2025 21:38 47s
Fix: Adding steps to ensure pipeline continues due to issues related … tests #87: Commit 2e986db pushed by skchronicles
December 10, 2024 15:33 1m 2s main
main
December 10, 2024 15:33 1m 2s
Adding steps to ensure continuation of pipeline with low coverage or … tests #86: Commit 42eaca9 pushed by skchronicles
December 9, 2024 23:40 44s main
main
December 9, 2024 23:40 44s
Patch: Use tmpdir/lscratch with fastqc due to gpfs issue. tests #85: Commit edff154 pushed by skchronicles
February 6, 2024 20:54 49s main
main
February 6, 2024 20:54 49s