Merge pull request #101 from b-cubed-eu/zenodo-release

Zenodo release
b-cubed-eu · Nov 5, 2024 · c780b2b · c780b2b
2 parents 25c6a62 + a26862d
commit c780b2b
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Showing 8 changed files with 142 additions and 24 deletions.
diff --git a/.zenodo.json b/.zenodo.json
@@ -1,6 +1,6 @@
 {
   "title": "gcube: Simulating Biodiversity Data Cubes",
-  "version": "1.0.0",
+  "version": "1.1.0",
   "license": "MIT",
   "upload_type": "software",
   "description": "<p>Simulation framework for biodiversity data cubes.<\/p>",

diff --git a/CITATION.cff b/CITATION.cff
@@ -25,4 +25,4 @@ abstract: "Simulation framework for biodiversity data cubes."
 identifiers:
 - type: url
   value: https://b-cubed-eu.github.io/gcube/
-version: 1.0.0
+version: 1.1.0
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: gcube
 Title: Simulating Biodiversity Data Cubes
-Version: 1.0.0
+Version: 1.1.0
 Authors@R: c(
     person("Ward", "Langeraert", , "[email protected]", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0002-5900-8109", affiliation = "Research Institute for Nature and Forest (INBO)")),

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,7 @@
+# gcube 1.1.0
+
+* Publish release on Zenodo.
+
 # gcube 1.0.0
 
 * Add package origin story.

diff --git a/README.Rmd b/README.Rmd
@@ -24,6 +24,7 @@ knitr::opts_chunk$set(
 [![Release](https://img.shields.io/github/release/b-cubed-eu/gcube.svg)](https://github.com/b-cubed-eu/gcube/releases)
 [![R-CMD-check](https://github.com/b-cubed-eu/gcube/actions/workflows/check_on_different_r_os.yml/badge.svg)](https://github.com/b-cubed-eu/gcube/actions/workflows/check_on_different_r_os.yml) [![codecov](https://codecov.io/gh/b-cubed-eu/gcube/branch/main/graph/badge.svg)](https://app.codecov.io/gh/b-cubed-eu/gcube/)
 [![repo status](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
+[![DOI](https://zenodo.org/badge/777812249.svg)](https://doi.org/10.5281/zenodo.14038996)
 
 <!-- badges: end -->
 

diff --git a/README.md b/README.md
@@ -12,6 +12,7 @@ status](https://www.r-pkg.org/badges/version/gcube)](https://CRAN.R-project.org/
 [![codecov](https://codecov.io/gh/b-cubed-eu/gcube/branch/main/graph/badge.svg)](https://app.codecov.io/gh/b-cubed-eu/gcube/)
 [![repo
 status](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
+[![DOI](https://zenodo.org/badge/777812249.svg)](https://doi.org/10.5281/zenodo.14038996)
 
 <!-- badges: end -->
 

diff --git a/codemeta.json b/codemeta.json
@@ -8,7 +8,7 @@
   "codeRepository": "https://github.com/b-cubed-eu/gcube",
   "issueTracker": "https://github.com/b-cubed-eu/gcube/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "1.0.0",
+  "version": "1.1.0",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -130,50 +130,113 @@
     {
       "@type": "SoftwareApplication",
       "identifier": "ggExtra",
-      "name": "ggExtra"
+      "name": "ggExtra",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=ggExtra"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "ggplot2",
-      "name": "ggplot2"
+      "name": "ggplot2",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=ggplot2"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "knitr",
-      "name": "knitr"
+      "name": "knitr",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=knitr"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "rmarkdown",
-      "name": "rmarkdown"
+      "name": "rmarkdown",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=rmarkdown"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "testthat",
       "name": "testthat",
-      "version": ">= 3.0.0"
+      "version": ">= 3.0.0",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=testthat"
     },
     {
       "@type": "SoftwareApplication",
       "identifier": "tidyterra",
-      "name": "tidyterra"
+      "name": "tidyterra",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=tidyterra"
     }
   ],
   "softwareRequirements": {
     "1": {
       "@type": "SoftwareApplication",
       "identifier": "assertthat",
-      "name": "assertthat"
+      "name": "assertthat",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=assertthat"
     },
     "2": {
       "@type": "SoftwareApplication",
       "identifier": "dplyr",
-      "name": "dplyr"
+      "name": "dplyr",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=dplyr"
     },
     "3": {
       "@type": "SoftwareApplication",
       "identifier": "gstat",
-      "name": "gstat"
+      "name": "gstat",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=gstat"
     },
     "4": {
       "@type": "SoftwareApplication",
@@ -183,22 +246,50 @@
     "5": {
       "@type": "SoftwareApplication",
       "identifier": "mnormt",
-      "name": "mnormt"
+      "name": "mnormt",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=mnormt"
     },
     "6": {
       "@type": "SoftwareApplication",
       "identifier": "purrr",
-      "name": "purrr"
+      "name": "purrr",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=purrr"
     },
     "7": {
       "@type": "SoftwareApplication",
       "identifier": "rlang",
-      "name": "rlang"
+      "name": "rlang",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=rlang"
     },
     "8": {
       "@type": "SoftwareApplication",
       "identifier": "sf",
-      "name": "sf"
+      "name": "sf",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=sf"
     },
     "9": {
       "@type": "SoftwareApplication",
@@ -208,21 +299,42 @@
     "10": {
       "@type": "SoftwareApplication",
       "identifier": "terra",
-      "name": "terra"
+      "name": "terra",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=terra"
     },
     "11": {
       "@type": "SoftwareApplication",
       "identifier": "tidyr",
-      "name": "tidyr"
+      "name": "tidyr",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=tidyr"
     },
     "12": {
       "@type": "SoftwareApplication",
       "identifier": "vegan",
-      "name": "vegan"
+      "name": "vegan",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=vegan"
     },
     "SystemRequirements": null
   },
-  "fileSize": "557.326KB",
+  "fileSize": "557.447KB",
   "citation": [
     {
       "@type": "SoftwareSourceCode",
@@ -234,7 +346,7 @@
           "familyName": "Langeraert"
         }
       },
-      "name": "gcube: Simulating Biodiversity Data Cubes. Version 1.0.0",
+      "name": "gcube: Simulating Biodiversity Data Cubes. Version 1.1.0",
       "url": "https://b-cubed-eu.github.io/gcube/"
     }
   ],

diff --git a/inst/CITATION b/inst/CITATION
@@ -2,12 +2,12 @@ citHeader("To cite `gcube` in publications please use:")
 # begin checklist entry
 bibentry(
   bibtype = "Manual",
-  title = "gcube: Simulating Biodiversity Data Cubes. Version 1.0.0",
+  title = "gcube: Simulating Biodiversity Data Cubes. Version 1.1.0",
   author = c( author = c(person(given = "Ward", family = "Langeraert"))),
   year = 2024,
   url = "https://b-cubed-eu.github.io/gcube/",
   abstract = "Simulation framework for biodiversity data cubes.",
-  textVersion = "Langeraert, Ward (2024) gcube: Simulating Biodiversity Data Cubes. Version 1.0.0. https://b-cubed-eu.github.io/gcube/",
+  textVersion = "Langeraert, Ward (2024) gcube: Simulating Biodiversity Data Cubes. Version 1.1.0. https://b-cubed-eu.github.io/gcube/",
   keywords = "simulation; data cubes; B-Cubed; biodiversity; Monte-Carlo",
 )
 # end checklist entry