Add prefix: eubopen (#1378)

This pull request curates a new prefix 'eubopen', which is a project focusing on organizing chemogenic library collections, advancing chemical probe discovery, profiling bioactive compounds, and making project data more accessible. The database didn't list any specific person to contact or a name (only a general help email), so under "contact" for "name" I put "Not listed". This PR updates the json and tsv files. https://pubmed.ncbi.nlm.nih.gov/39618964/ --------- Co-authored-by: Charles Tapley Hoyt <[email protected]> Co-authored-by: Ben Gyori <[email protected]>
biopragmatics · Jan 28, 2025 · 39ba3f9 · 39ba3f9
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diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json
@@ -37257,6 +37257,41 @@
       "uri_format": "http://data.europa.eu/89h/$1"
     }
   },
+  "eubopen": {
+    "contact": {
+      "email": "[email protected]",
+      "name": "Claudia Tredup",
+      "orcid": "0000-0001-6518-3344"
+    },
+    "contributor": {
+      "email": "[email protected]",
+      "github": "nalikapalayoor",
+      "name": "Nalika Palayoor",
+      "orcid": "0009-0008-8406-631X"
+    },
+    "description": "EUbOPEN is a project focusing on organizing chemogenic library collections, advancing chemical probe discovery, profiling bioactive compounds, and making project data more accessible.",
+    "example": "EUB0000221",
+    "github_request_issue": 1378,
+    "homepage": "https://gateway.eubopen.org",
+    "name": "Enabling and Unlocking Biology in the Open",
+    "pattern": "^EUB\\d{7}$",
+    "publications": [
+      {
+        "doi": "10.1039/d4md00735b",
+        "pmc": "PMC11605244",
+        "pubmed": "39618964",
+        "title": "Toward target 2035: EUbOPEN - a public-private partnership to enable & unlock biology in the open",
+        "year": 2024
+      }
+    ],
+    "reviewer": {
+      "email": "[email protected]",
+      "github": "bgyori",
+      "name": "Benjamin M. Gyori",
+      "orcid": "0000-0001-9439-5346"
+    },
+    "uri_format": "https://gateway.eubopen.org/compound/$1"
+  },
   "euclinicaltrials": {
     "biocontext": {
       "prefix": "EUCLINICALTRIALS"

diff --git a/src/bioregistry/data/curated_papers.tsv b/src/bioregistry/data/curated_papers.tsv
@@ -120,6 +120,7 @@ pubmed	relevant	orcid	date_curated	relevancy_type	pr_added	notes
 39607847	0	0009-0009-5240-7463	2024-12-03	irrelevant_other	1296	
 39611775	0	0009-0009-5240-7463	2024-12-11	non_resource_paper	1305	
 39616207	0	0009-0009-5240-7463	2024-12-09	irrelevant_other	1305	
+39618964	1	0009-0008-8406-631X	2025-01-25	new_prefix	1378	
 39624166	0	0009-0008-8406-631X	2025-01-23	not_identifiers_resource	1377	
 39626458	0	0009-0009-5240-7463	2024-12-10	not_identifiers_resource	1305	
 39629064	0	0009-0009-5240-7463	2024-12-09	not_identifiers_resource	1305