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build: rm => add
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That'll do it
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edmundmiller committed Dec 7, 2024
1 parent a70f67e commit 07fbac7
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Showing 2 changed files with 4 additions and 2 deletions.
4 changes: 3 additions & 1 deletion modules/nf-core/bcl2fastq/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -16,9 +16,11 @@ LABEL org.opencontainers.image.license="https://emea.support.illumina.com/conten

# 'ps' command is need by some nextflow executions to collect system stats
# Install procps and clean up
RUN apk --no-cache del \
RUN apk --no-cache add \
bash \
procps

# Link hostname cmd to fix hardcoded path
RUN ln -s /bin/hostname /usr/bin/hostname

# ENTRYPOINT ["/bin/bash"]
2 changes: 1 addition & 1 deletion modules/nf-core/bcl2fastq/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ process BCL2FASTQ {
tag {"$meta.lane" ? "$meta.id"+"."+"$meta.lane" : "$meta.id" }
label 'process_high'

container "nf-core/modules/bcl2fastq:971ed386e4ae7014"
container "nf-core/modules/bcl2fastq:fc1f3591451eb325"

input:
tuple val(meta), path(samplesheet), path(run_dir)
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