Swap transdecoder predict to nf-test #7296
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nvnieuwk
approved these changes
Jan 15, 2025
| @@ -5,7 +5,7 @@ process TRANSDECODER_PREDICT { | |||
| conda "${moduleDir}/environment.yml" | |||
| container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? | |||
| 'https://depot.galaxyproject.org/singularity/transdecoder:5.5.0--pl5262hdfd78af_4': | |||
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Your Singularity image is still at version 5.5.0, causing the tests to fail.
SPPearce
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Jan 30, 2025
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Swapping transdecoder/predict to nf-test.
There is some funky behaviour here with the prefix.
When I tried using the
-O $prefixas it was previously, the tool tries to look inside a folder calledprefixto for the transdecoder/longorf output. So I removed that.